Gene Information

Name : Shewana3_2361 (Shewana3_2361)
Accession : YP_869996.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2838414 - 2838917 bp
Length : 504 bp
Strand : +
Note : PFAM: Integrase, catalytic region; KEGG: son:SOA0129 transposase, IS3 family

DNA sequence : 
ATGGCTTGGGTAACGGATATTACCTACATCAAAACTCATGAAGGTTGGTTATATCTGGGTGCTGTGATGGACTTATTTTC
TCGTCGTATTATTGGGTGGTCGATGGGCAGCAGAATAACCAAAGAACTGGCATTAGACGCGCTTTTAATGGCTGTATGGC
GCCGTAAGCCTACAGGTAAAGTGTTAGTCCATTCAGATCAGGGAAGCCAATATACTAGCCATGACTGGAGTGAATTTCTG
ACCGCACATGGATTGGAAGGCAGCATGAGTCGACGTGGTAGTTGCCATGATAATGCAGTGGCTGAGAGTTTCTTTCAGCT
ATTAAAGCGTGAGCGGATCAAGCGGAAAATCTATTCGACAAGAGAAGCGGCTAAAAGTGATATTTTTAATTATATCGATA
TGTTTTATAACCCTAAACGGCAGCATAGTTCCAATCATGGCTTATCACCGTTAGAGTATGAACGTCAGTATTTTAATGAG
GCTCAAAGTTGTCTAGTGAAATAG

Protein sequence : 
MAWVTDITYIKTHEGWLYLGAVMDLFSRRIIGWSMGSRITKELALDALLMAVWRRKPTGKVLVHSDQGSQYTSHDWSEFL
TAHGLEGSMSRRGSCHDNAVAESFFQLLKRERIKRKIYSTREAAKSDIFNYIDMFYNPKRQHSSNHGLSPLEYERQYFNE
AQSCLVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDC7B_2039 YP_005163480.1 transposase-like protein Not tested Not named Protein 2e-21 46
CDCE8392_1961 YP_005134492.1 transposase-like protein Not tested Not named Protein 2e-21 46
l7094 CAD33743.1 ORF B protein Not tested PAI I 536 Protein 2e-24 43
orfB CAE85178.1 OrfB protein, IS911 Not tested PAI V 536 Protein 2e-24 43
unnamed AAC31485.1 L0006 Not tested LEE Protein 4e-24 43
ECs4537 NP_312564.1 hypothetical protein Not tested LEE Protein 6e-24 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_2361 YP_869996.1 integrase catalytic subunit VFG1484 Protein 1e-24 43