Gene Information

Name : Shewana3_2344 (Shewana3_2344)
Accession : YP_869979.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Resistance
Product : arsenical pump membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 2820383 - 2821666 bp
Length : 1284 bp
Strand : +
Note : TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: sbo:SBO_3500 arsenical pump membrane protein

DNA sequence :
ATGTGGTTGGCAGGGGCGATTTTTGTTCTCACCATAGTGTTAGTGATTTGGCAACCTAAGGGTTTAGGCATAGGTTGGAG
TGCCACCTTGGGCGCCGTATTGGCCTTGCTATTAGGCGTAGTGCAGTTAGGGGATATTCCCGTGGTGTGGAATATCGTCT
GGAATGCGACCGCCACCTTTATCGCCGTGATCATCATCAGTTTATTATTGGATGAGTCAGGATTTTTCGAATGGGCCGCG
CTGCATGTGGCCCGCTGGGGTAAAGGTCGTGGCCGTTTACTCTTTACTTACATAGTGTTACTCGGTGCTACCGTTGCAGC
CTTATTCGCCAATGATGGCGCGGCGCTGATCCTCACCCCAATCGTGATTGCGATGTTACTGGCGCTGGGCTTTAGCGCCG
GAGCCACCTTAGCCTTTGTGATGGCCGCAGGTTTTATTGCCGATACCGCAAGTTTGCCGTTAATCGTCTCTAACCTAGTG
AATATCGTTTCCGCGGACTTTTTCAAGATAGGCTTTAACGAATATGCCGCTGTAATGGTGCCCGTCGATATTGCCGCGAT
TAGCGCCACATTAGTGATGCTGCATGTGTTTTTCCGCAAAGATATTCCAGCCACCTACGACCTAGAAAAACTGCGCGAGC
CTAAGGCCGCAATTCGCGACCTCAACACCTTTAAAACCGGTTGGGGAGTTTTAGTCTTACTCTTAGTCGGCTTTTTTGGC
CTAGAACCCCTCGGCGTGCCCGTGAGTTTAGTTGCTGCCGTGGGCGCGCTTATTCTGTTTGTGGTCGCCAAGAAAGGCCA
TGGGATAGATACCACTAAGGTACTGCGCGGCGCACCATGGCAAATAGTGATCTTTTCACTGGGTATGTATCTGGTGGTTT
ATGGTCTGCGTAACGCAGGCTTAACGGATTATCTATCTCACGTGTTGGACAGCTTGGCAGCACAAGGACTTTGGGTTGCC
ACTATGGGCACAGGTTTTTTAGTCGCCTTTTTATCTTCCATCATGAACAACATGCCAACCGTGTTAGTCGGCGCCCTGTC
GATAGACGGTAGCAATGCAACCGGCGTGATTAAAGTAGCCATGATCTACGCTAACGTGATAGGCAGCGATTTAGGCCCCA
AAATCACCCCTATCGGCAGTTTAGCAACCCTGCTATGGCTGCATGTGCTGGCGCAGAAAAATATCAATATAACTTGGGGT
TACTATTTCCGCGTCGGCATAGTGATGACAGTACCTGTGCTGTTTGTCACCCTAGCGGCACTGGCGCTGCGCCTCTCCTT
CTGA

Protein sequence :
MWLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALLLGVVQLGDIPVVWNIVWNATATFIAVIIISLLLDESGFFEWAA
LHVARWGKGRGRLLFTYIVLLGATVAALFANDGAALILTPIVIAMLLALGFSAGATLAFVMAAGFIADTASLPLIVSNLV
NIVSADFFKIGFNEYAAVMVPVDIAAISATLVMLHVFFRKDIPATYDLEKLREPKAAIRDLNTFKTGWGVLVLLLVGFFG
LEPLGVPVSLVAAVGALILFVVAKKGHGIDTTKVLRGAPWQIVIFSLGMYLVVYGLRNAGLTDYLSHVLDSLAAQGLWVA
TMGTGFLVAFLSSIMNNMPTVLVGALSIDGSNATGVIKVAMIYANVIGSDLGPKITPIGSLATLLWLHVLAQKNINITWG
YYFRVGIVMTVPVLFVTLAALALRLSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 2e-153 86
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 6e-104 59
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 3e-106 59
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 8e-100 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_2344 YP_869979.1 arsenical pump membrane protein BAC0578 Protein 1e-154 87
Shewana3_2344 YP_869979.1 arsenical pump membrane protein BAC0576 Protein 7e-154 87
Shewana3_2344 YP_869979.1 arsenical pump membrane protein BAC0031 Protein 2e-155 86
Shewana3_2344 YP_869979.1 arsenical pump membrane protein BAC0577 Protein 7e-147 82
Shewana3_2344 YP_869979.1 arsenical pump membrane protein BAC0574 Protein 1e-103 59
Shewana3_2344 YP_869979.1 arsenical pump membrane protein BAC0575 Protein 4e-106 58