Gene Information

Name : Shewana3_1791 (Shewana3_1791)
Accession : YP_869430.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Unknown
Product : phage integrase family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2118970 - 2120205 bp
Length : 1236 bp
Strand : +
Note : PFAM: phage integrase family protein; KEGG: vvy:VV2262 phage integrase

DNA sequence : 
ATGGGAAGGAGTACAAATAAGCTGACTGCAAAAGCGGTGCTCAATGCTAAAGCGGAAGCAAAGCCCTATAGATTGTCAGA
TGGTGGCAATCTCTATCTCTATGTGCGCACTGCAGGGAAAACGTGGGAATTTAGATACATACGTCCCTCCACCAGCAAAC
CCACCTATTTTGGTTTAGGTTCATACCCTGACGTATCCTTAGCTGAGGCGCGTGATAAAGCGCTAGAAGCGCGAAAAAAC
TTGGCCGAAGGCATCGACCCTCAACTACTTAAAGTTGAAAACAAATTAAAAGCCGCAACAGAGAACGCTCAAACTCTCAA
GCATATTGCGCAAATGTGGATGGACTCAAAGCAGGGAAGCATTAAGCCTAAAACCATCGAAGGCAATTGGCGCAAGCTTG
AGCTGTATGCCTTCCCTAAACTGGGGAGTATTGCGATTAGCAGACTCACGGCTCCCATAGCCATTGCTGCGCTCAAGCCC
CTAGAGCAGAAGGGGCATCTTGAAACGGTTAAGCGTACCGCTCAGTTGCTGAATGAAATCATGAACTTTTCAGTTAACTC
TGGTTACATTCACGCCAATCCGTTGTCAGGTATTCGAGAAGTTTTTAGAAAGAGCAAAGTAGAACATCTGAAAGCATTAA
AACCAGCAGAGCTAGCTGAGTTGTTGCAGACCATTGCAAACGCCAATTTATTGTTAACGACCCGGTGTTTGATTGAATGG
CAATTGCACACAATGACCAGGCCAAATGAAGCGGCCGGAGCCCGTTGGGAAGAAATCGATTTTGATGCCAAACTTTGGAC
TATTCCTGAATCACGCATGAAAATGAATCGTGAGCATATTATCCCGCTTACAGAGCATACCCTCACAATACTTGAAACTG
TTAAGCCGATTAGTGAACAGAGCCAATTTGTCTTTCCATCATCTAAAGATCCTCAAAAGCACACAGATCCAGAAACCATC
AACAAAGCATTAGGGCGCATGGGATTAAAGGGAAGAACAACGGGGCATGGTTTACGCTCACTGGCGAGCACTACCTTAAA
CGAGCAAGGCTTTGATGGTGATGTCATTGAGGCCGCGTTAGCCCACGTTGATAAAAACCAAATCCGCAGTGCCTACAATC
GCACGACCTACCTAGAGCGACGGACCAAGTTAATGGAGTGGTGGAGCAATCATATTGCCACTGCGGCTGTCGGGTCTTTG
TCAGTCACAGCGGGTTCAAGAAAATTAGGTGGATGA

Protein sequence : 
MGRSTNKLTAKAVLNAKAEAKPYRLSDGGNLYLYVRTAGKTWEFRYIRPSTSKPTYFGLGSYPDVSLAEARDKALEARKN
LAEGIDPQLLKVENKLKAATENAQTLKHIAQMWMDSKQGSIKPKTIEGNWRKLELYAFPKLGSIAISRLTAPIAIAALKP
LEQKGHLETVKRTAQLLNEIMNFSVNSGYIHANPLSGIREVFRKSKVEHLKALKPAELAELLQTIANANLLLTTRCLIEW
QLHTMTRPNEAAGARWEEIDFDAKLWTIPESRMKMNREHIIPLTEHTLTILETVKPISEQSQFVFPSSKDPQKHTDPETI
NKALGRMGLKGRTTGHGLRSLASTTLNEQGFDGDVIEAALAHVDKNQIRSAYNRTTYLERRTKLMEWWSNHIATAAVGSL
SVTAGSRKLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 4e-129 66
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 4e-129 66
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 2e-129 66
int AAK20773.1 integrase Not tested VPI Protein 2e-98 53
int AAK20803.1 integrase Not tested VPI Protein 2e-98 53
unnamed AAA82714.1 integrase Not tested VPI Protein 2e-98 53
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 3e-98 53
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 3e-98 53
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 3e-93 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_1791 YP_869430.1 phage integrase family protein VFG1092 Protein 2e-129 66