Gene Information

Name : Shewana3_1538 (Shewana3_1538)
Accession : YP_869178.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 1793789 - 1794538 bp
Length : 750 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: son:SO2927 ABC transporter, ATP-binding protein

DNA sequence : 
ATGTCTAACGTCGTTTCAAAAAACAGTGCCATCAATGTTGTTAACCTCGAAAAATCGGTGACTACTCAGGAAGGTTCGCT
CACTATCCTCAAGGGCATTAACTTAGATGTCAAGCAGGGGGAAAGTGTGGCGATATTAGGCCCCTCAGGTTCGGGCAAAT
CGACACTGCTGGGCTTACTCGCCGCGCTCGATACCCCCACGTCGGGGGAGATTTGGCTCGATGGCCAAGCCCTATCACCG
CTCAATGAAGAACAGAAAGCCGCGCTGCGTAAGCAGAAAGTGAGCTTTATTTTTCAATCTTTTATGTTAGTTGATACCTT
AACTGCCCTCGAAAATGTGATGTTACCTGCCGAGCTTGCTGGAGTTAAAAATGCCAAGGAGAAGGCCGAGGCTATGCTGG
GGCGCGTGGGGTTATCCCACCGTTTGACCCATTTACCTAAACAATTATCCGGCGGCGAGCAGCAAAGGGTGGCCATTGCC
CGCGCCTTTATTTGTGAACCTAAGGTGCTATTTGCCGACGAGCCAACCGGCAATTTGGACAGTGTTAACGGCCATAAAAT
TGCCGATATGTTGTTTGAGCTGAACCAAGAGAGCCACACCACGCTCATCCTGGTCACCCACGACTTGCAATTGGCGAAGC
GCTGCCAACGGCAACTGGTTATGGACAACGGCCACTTACAGGAAGAGTTAGATTCGGCCCAATCGCACAGCGTGAATGAC
AACCTTGAATTAAGCGCCAAGGAGGCCTAA

Protein sequence : 
MSNVVSKNSAINVVNLEKSVTTQEGSLTILKGINLDVKQGESVAILGPSGSGKSTLLGLLAALDTPTSGEIWLDGQALSP
LNEEQKAALRKQKVSFIFQSFMLVDTLTALENVMLPAELAGVKNAKEKAEAMLGRVGLSHRLTHLPKQLSGGEQQRVAIA
RAFICEPKVLFADEPTGNLDSVNGHKIADMLFELNQESHTTLILVTHDLQLAKRCQRQLVMDNGHLQEELDSAQSHSVND
NLELSAKEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-26 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 6e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_1538 YP_869178.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-34 48
Shewana3_1538 YP_869178.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-33 45