Gene Information

Name : Shewana3_1527 (Shewana3_1527)
Accession : YP_869167.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Unknown
Product : transposase IS200-family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1943
EC number : -
Position : 1777531 - 1777968 bp
Length : 438 bp
Strand : +
Note : PFAM: transposase IS200-family protein; KEGG: vch:VCA0275 IS1004 transposase

DNA sequence :
ATGGGCGATTACAGAAGTTCATCACATGTTTACTGGCGTTGTAAATATCATATCGTTTGGACGCCTAAGTACAGATTCAA
AATTCTAAAAGGTAACCTTGGTAAAGAGCTCTACAGGTCGATTTATATTCTATGCAATATGAAAAGTTGTGAGGTCTTAG
AATTAAACGTCCAGATAGATCATGTGCATCTAGTCGTGATAATTCCCCCAAAGTTGTCAGTATCCACATTAATGGGGATA
TTGAAGGGTAGGAGCGCAATAAGGCTTTTTAACAAATTCCCTCATGCTCGCAAGAAGTTATGGGGAAATAGCTTTTGGGC
GAGGGGTTATTTTGTTGATACGGTAGGCGTAAATGAGGAAATCATAAGACGCTATGTTCGCCATCAAGATAAGCAAGATC
TAGAGCATGATGCTCAATTGTCGCTACAGATGAAGTAG

Protein sequence :
MGDYRSSSHVYWRCKYHIVWTPKYRFKILKGNLGKELYRSIYILCNMKSCEVLELNVQIDHVHLVVIIPPKLSVSTLMGI
LKGRSAIRLFNKFPHARKKLWGNSFWARGYFVDTVGVNEEIIRRYVRHQDKQDLEHDAQLSLQMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 3e-22 45
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 2e-22 43
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 7e-21 42
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-20 42