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Name : Shewana3_0151 (Shewana3_0151) Accession : YP_867801.1 Strain : Shewanella sp. ANA-3 Genome accession: NC_008577 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 175003 - 177111 bp Length : 2109 bp Strand : + Note : TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: son:SO0166 general secretion pathway protein D DNA sequence : ATGAATAACAAACGGATTCGACGCAAACTGATTGCTGGAGTTGTGGCAGGCGCCACTATGCTGACCTCGCAATTTGTTTG GTCTGAACAATATGCGGCCAACTTTAAAGGCACTGATATCCAAGAATTTATCAACATTGTTGGTAAAAACCTGAATAAAA CCATCATTGTTGACCCGACCATTCGCGGCAAGATCAACGTGCGCAGTTATGATCTGCTCAACGATGAGCAGTATTACCAA TTCTTCCTCAACGTGTTGCAAGTCTACGGTTATGCCATCGTCGAGATGGAAAACAACGTCATCAAAGTCATTAAAGACAA AGATGCGAAAACCGCGGCGATTCGTGTTGCTAACGACAACGACCCAGGTTTAGGTGATGAAATGGTCACCCGCATCGTGG CGCTGTATAACACCGAAGCCAAGCAGTTAGCGCCGTTGTTACGTCAGTTAAACGATAACGCCGGTGGCGGTAACGTAGTG AACTACGACCCATCGAACGTACTGATGCTGTCAGGCCGCGCCGCTGTAGTTAACAAGTTAGTCGAAATCGTTCGCCGTGT AGATAAACAGGGTGATACCTCGGTACAAGTAGTGCCGCTCGAATACGCCTCAGCCGGTGAAATGGTGCGAATTATCGATA CCCTTTACCGCGCGACAGCTAACCAAGCGCAGCTCCCAGGACAAGCGCCTAAGGTTGTTGCCGACGAGCGTATTAACGCC GTCGTGGTCAGTGGTGATGAAAAGAGCCGCCAACGCGTGGTTGAGCTTATCCATCGCCTCGATGCCGAGCAGGCTAGCAC GGGTAACACTAAGGTACGTTATTTACGTTATGCCAAGGCTGAAGACTTGGTTGAAGTGCTGACCGGATTTGCGCAAAAGC TTGAGGGTGAAAAAGATCCAAGCGCCCAAGCTGGCGGTAAACGTCGTAATGAAATCAATATTATGGCCCACACTGATACC AACGCCTTAGTGATCAGCGCCGAGCCAGATCAAATGCGCACAATCGAGAGCGTGATCAACCAACTCGATATTCGCCGCGC TCAAGTATTAGTTGAAGCCATTATCGTGGAAGTTGCCGAAGGCGATAACGTCGGCTTTGGGGTGCAATGGGCCGCGAAAG CGGATGGTGGCACTCAGTTCAATAACTTAGGCCCAACCATTGGTGAAATTGGCGCTGGTATTTGGCAGGCACAAGATAAA GAAGGGACTTATATTACCAACCCTAGTACGGGGGAAGTGATCGGTAAAAACCCTGATACTAAAGGCGATGTTACTTTACT CGCCCAAGCCTTAGGTAAAGTGAATGGTATGGCGTGGGGCGTGGCCATGGGCGACTTTGGCGCCCTAGTTCAAGCTGTGT CGGCCGATACCAACTCAAACGTTCTGGCAACACCTTCGATTACGACATTGGATAACCAAGAAGCCTCGTTTATCGTCGGT GACGAAGTGCCGATTCTGACGGGTTCTACCGCCAGCTCAAACAACAGTAACCCATTCCAAACCGTTGAACGGAAAGAGGT TGGGGTGAAGTTAAAAGTGGTGCCTCAAATCAACGAAGGCAACGCGGTTAAGCTTGCGATTGAGCAAGAAGTCTCGGGCG TAAACGGTAACACGGGTGTAGATATCTCCTTCGCGACTCGCCGTTTAACCACCACTGTAATGGCCGACTCAGGACAAATC GTGGTGCTCGGTGGTTTGATTAACGAAGAAGTCCAAGAAAGCGTGCAGAAAGTGCCATTCCTCGGCGATATTCCGGTGCT CGGACACTTATTCAAGTCTTCTTCCAGTAAGAAGACCAAAAAGAACCTGATGATCTTTATCAAGCCCACCATTATCCGTG ATGGTGTGACTATGGAAGGTATCGCAGGCCGTAAATACAACTATTTCAGAGCATTACAACTTGAGCAGCAAGAGCGCGGC GTGAACCTGATGCCAAATACTCAAGTGCCAATTCTGGAAGAATGGAATCAATCTGAATATCTGCCGCCCGAAGTGAACGA CATTTTAGATCGTTACAAAGAAGGTAAAGGGTTAGAAACTCAGATGCGTAAAACGGACTCGACCCTCAAGTCGCTGGATG AAAACAAGAACAAAGACAAAACACAATGA Protein sequence : MNNKRIRRKLIAGVVAGATMLTSQFVWSEQYAANFKGTDIQEFINIVGKNLNKTIIVDPTIRGKINVRSYDLLNDEQYYQ FFLNVLQVYGYAIVEMENNVIKVIKDKDAKTAAIRVANDNDPGLGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVV NYDPSNVLMLSGRAAVVNKLVEIVRRVDKQGDTSVQVVPLEYASAGEMVRIIDTLYRATANQAQLPGQAPKVVADERINA VVVSGDEKSRQRVVELIHRLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAQKLEGEKDPSAQAGGKRRNEINIMAHTDT NALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVAEGDNVGFGVQWAAKADGGTQFNNLGPTIGEIGAGIWQAQDK EGTYITNPSTGEVIGKNPDTKGDVTLLAQALGKVNGMAWGVAMGDFGALVQAVSADTNSNVLATPSITTLDNQEASFIVG DEVPILTGSTASSNNSNPFQTVERKEVGVKLKVVPQINEGNAVKLAIEQEVSGVNGNTGVDISFATRRLTTTVMADSGQI VVLGGLINEEVQESVQKVPFLGDIPVLGHLFKSSSSKKTKKNLMIFIKPTIIRDGVTMEGIAGRKYNYFRALQLEQQERG VNLMPNTQVPILEEWNQSEYLPPEVNDILDRYKEGKGLETQMRKTDSTLKSLDENKNKDKTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-146 | 52 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 3e-155 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Shewana3_0151 | YP_867801.1 | general secretion pathway protein D | VFG2047 | Protein | 4e-145 | 52 |
