Gene Information

Name : Shewana3_1387 (Shewana3_1387)
Accession : YP_869027.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : -
Position : 1601734 - 1602900 bp
Length : 1167 bp
Strand : +
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: vpa:VP0236 nucleotide sugar dehydrogenase

DNA sequence :
ATGAAGATTGCTATAGCCGGTACAGGTTATGTAGGTTTATCAAATTCTGTACTCTTAGCGCAGAATCATAAAGTGACCGC
AGTCGATGTTGTTGATTATAAAGTTGAATTAATTAATAATCGTAAGTCTCCGATTGTTGATGCTGAAATTGAATATTTTT
TAGCTAATTATGAACTTGATTTAACTGCGACTTTAGATAGACAACTTGCATATCAAGATGCTGACTTTGTTATTATTGCC
ACACCAACAGATTATGATCCAAAGACTAATTATTTTAATACTTCATCTGTTGAATCTGTTATTCAAGATGTTTTAATGAT
TAATCCGAATGCTGTTATGGTGATTAAGTCTACGGTTCCTGTTGGGTTTACCGCTAAAGTTAAACAAAAATACAATTGTG
ATAATATTCTTTTTTCACCTGAGTTTTTGCGCGAGGGTAAGGCACTTTATGATAATTTGCACCCATCACGTATCATTGTT
GGTGAACGCTCAGAACGCGCTGAAGTTTTTGCAAATTTATTAGTGCAAGGTGCGATTAAACAAGATATTCAAGTGTTATT
TACTGATTCTATTGAAGCTGAAGCGGTTAAATTATTCTCTAATACATATCTCGCGATGCGTGTTGCTTACTTTAATGAGC
TTGATACTTACGCTGAAGCCCATGGTTTAAACACTCGTCAAATTATCGAGGGTGTATGTTTAGATCCTCGTATTGGAAAT
CATTACAATAATCCGTCGTTTGGGTATGGTGGTTATTGTTTGCCTAAAGATACCAAGCAACTTAGAGCCAATTACGCCGA
TGTACCTAATAGTATTATTGGCGCGATTGTTGAGTCGAACACTACGCGTAAAGATTTTATCGCGGATTCTATTTTAAGTC
GTAATCCTAAAGTTGTCGGCATTTATCGACTGATCATGAAGGCTGGTTCCGATAATTTTAGAGCTTCGAGCATTCAAGGC
ATAATGAAGCGTATTAAGGCTAAGGGGATTGAAGTTGTCATTTATGAACCCGTTTTAAATGAGTCGGAGTTTTTCCACTC
GAGGGTTATAACTGACCTTGCTGAATTTAAAGCGAAAGCGGATGTGATTGTTTCTAATCGTATGGCTAATGAACTCGCAG
ATGTTGCTGATAAACTATATACACGCGATTTATTTGGTAGTGATTAA

Protein sequence :
MKIAIAGTGYVGLSNSVLLAQNHKVTAVDVVDYKVELINNRKSPIVDAEIEYFLANYELDLTATLDRQLAYQDADFVIIA
TPTDYDPKTNYFNTSSVESVIQDVLMINPNAVMVIKSTVPVGFTAKVKQKYNCDNILFSPEFLREGKALYDNLHPSRIIV
GERSERAEVFANLLVQGAIKQDIQVLFTDSIEAEAVKLFSNTYLAMRVAYFNELDTYAEAHGLNTRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFIADSILSRNPKVVGIYRLIMKAGSDNFRASSIQG
IMKRIKAKGIEVVIYEPVLNESEFFHSRVITDLAEFKAKADVIVSNRMANELADVADKLYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 3e-93 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_1387 YP_869027.1 UDP-glucose/GDP-mannose dehydrogenase VFG0963 Protein 1e-99 56