Gene Information

Name : Shewana3_1278 (Shewana3_1278)
Accession : YP_868918.1
Strain : Shewanella sp. ANA-3
Genome accession: NC_008577
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 1489643 - 1490584 bp
Length : 942 bp
Strand : +
Note : PFAM: regulatory protein, LysR; LysR, substrate-binding; KEGG: rso:RSc2588 probable transcription regulator protein

DNA sequence : 
ATGGAACTTCGCCACCTTCGTTGCTTCCTTGCCGTTGCTGACGAACTCCACTTCGCTCGTGCGGCGGAGAAACTGCACAT
CGAACAGTCACCGCTGTCACGTGCTATCAAAGAACTGGAAGAAGACTTGGGCGAGCAGTTATTCGTCCGCACCAGCCGCA
GCACACGGTTGACACGGGCAGGCAAACTGTTTTTGGAGCATGTGCCGCGCGTCTTCACTGCTTTGGAGCAGGCGCGCGAC
AGCGTGAAGGCTGCAGCCAATGGCTTTCACGGACAGCTGCGCATCGCGTTGTCCGACGGCATCACACCATCGCGTCTACC
GATCTTGCTGGCGCTTTGCAGACAGGAGGAACCGGAAGTTGAACTCAGATTCTTCGAGGTGCCGCTGTCGCAGCAGATCA
AGGGGTTGCAGGACGACCTGTATGACGTGGGATTCGCACAATCCGATGACGTGGGTGACGGCATCACCGTAGAGGCGGTG
TGGCACGATCCGCTCATGGTCGCAGTACCAGCCCGGCATCCATTGCTGATACATAAACGCATTCCTCTCGATGAAGTGCT
GCGCTATCCACTGGTGCTATGTGATCCCAAGGTATGTGAGGGCCATACACGCCAGGTCGAACGTGTGTTGCGGCGTGCGG
AGCAAGAACCCTTGATCGCCGAGCGCGTGGCCTCCTGCGACCTGATGATGGCGCTGGTGTCAGCCGGCTTTGCTCTGGGC
CTGGCGGGCGCGCCGCATATCGCTTCCAGCCGCGAATCTGGTGTGGTCGCTCGGCCACTAGCGGGCCGTTCGCCGATGCT
GACAACGTATCTGCTGCATCGGGAAGCGGAGACCTCGGAAGTGCTGGCCCGTTTCATCGAGCGGGTACAGGCTATCGAAT
CGCCTGAGGGCGTCAGGCTAGTGCCACCGCCCGAATCCGATCAGGAGGAAATCGAACTATGA

Protein sequence : 
MELRHLRCFLAVADELHFARAAEKLHIEQSPLSRAIKELEEDLGEQLFVRTSRSTRLTRAGKLFLEHVPRVFTALEQARD
SVKAAANGFHGQLRIALSDGITPSRLPILLALCRQEEPEVELRFFEVPLSQQIKGLQDDLYDVGFAQSDDVGDGITVEAV
WHDPLMVAVPARHPLLIHKRIPLDEVLRYPLVLCDPKVCEGHTRQVERVLRRAEQEPLIAERVASCDLMMALVSAGFALG
LAGAPHIASSRESGVVARPLAGRSPMLTTYLLHREAETSEVLARFIERVQAIESPEGVRLVPPPESDQEEIEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-75 53
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 1e-53 41