|
Name : leuS (Shewana3_1001) Accession : YP_868642.1 Strain : Shewanella sp. ANA-3 Genome accession: NC_008577 Putative virulence/resistance : Unknown Product : leucyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0495 EC number : 6.1.1.4 Position : 1170450 - 1173029 bp Length : 2580 bp Strand : - Note : leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl DNA sequence : ATGCAAGAGCAATATAATCCCTCAGAAATTGAAGCCTTAGTGCAAAAGCACTGGCACGACAACAAAACCTTTGAAGTTAC TGAAGATGCGAACAAAGAAAAGTTTTATTGCCTTTCGATGTTCCCCTATCCTTCAGGTCGACTCCACATGGGACACGTTC GCAACTATACCATAGGCGATGTGGTTGCCCGCTTCCAGCGTCTTCAAGGCAAAAACGTGCTACAACCTATCGGTTGGGAC TCTTTCGGTTTGCCTGCAGAAAACGCCGCAATCAACAACAAAACAGCCCCAGCACCATGGACTTATCAAAATATTGAGTA CATGAAGAATCAGCTAAAACTGTTAGGTTTTGGCTATGACTGGAGCCGTGAAATCGCCACTTGTACCCCAGAATACTACC GCTGGGAACAATGGTTCTTCACTAAACTGTACGAAAAAGGCTTAGTTTACAAGAAGACAGCTTCTGTTAACTGGTGCCCT AACGATGAAACCGTACTGGCCAACGAGCAGGTACAAGACGGTTGCTGCTGGCGTTGTGATACCCCTGTAGAACAAAAAGA AATTCCACAGTGGTTCATTAAGATCACCGCCTACGCCGAAGAACTGTTAAACGATATCGACACCTTAGACGGCTGGCCTG AGCAAGTTAAGACCATGCAGCGCAACTGGATTGGTCGCAGTGAAGGCGTGGAAATGACCTTCGGTGTGGCAGGTAGCGAC AAGTCATTCGATATCTACACAACCCGTCCAGATACCCTGATGGGCGTAACCTATGTGGCTATTGCTGCGGGTCATCCATT AGCAGAATTAGCGGCTCAAACTAACCCAGAGCTGGCTCAATTTATTGAAGAGTGCAAAAACAGCACCACTTCAGAAGCCG ATTTGGCCACCATGGAAAAACGCGGTGTAGCAACAGGCCTTTACGCGATTCACCCCATCACTGGCAAACAAGTGCCTATT TGGGCGGCGAACTTTGTACTGATGAACTACGGCACCGGCGCCGTAATGTCAGTCCCTGGCCACGACCAACGCGATTACGA ATTTGCTAAAAAGTACAATCTGCCCATCGAAGCAGTTATCAAGCCTGTTGATGGCGAGTTAGACATCAGCGAAGCGGCTT ACACCGAAAAAGGCGTACTGTTTAACTCTGGTGAGTTCGACGGTTTAGACTTTGACGGCGCCTTCAATGCCATCGCCGAC AAGTTAGTGGCTGAAGGTAAAGGCAAACGCCAAGTCAACTATCGCCTACGCGACTGGGGTGTATCACGTCAACGTTACTG GGGCGCACCTATTCCTATGGTGACCTTAGCCGACGGCACTGTTATTCCAACGCCTGAAGATCAACTGCCAGTTATTCTGC CAGAAGATGTGGTGATGGATGGTATTCAAAGCCCAATCAAGGCCGACAAAGAATGGGCGAAAACCCAAGTTAACGGCCAA GATGCGCTGCGCGAAACCGATACCTTCGATACCTTTATGGAATCTTCTTGGTATTACGCCCGTTACTGCAGCCCACAAGC AGACCAAATGTTAGATCCGACTAAGGCTAACTACTGGTTACCAGTAGATCAGTATATTGGTGGTATCGAACACGCTTGTA TGCACTTGTTATACTTCCGCTTCTTCCACAAGTTGCTGCGTGATGCGGGTCTAGTGAACTCTAACGAGCCAGCGAAACAA CTGCTGACTCAGGGCATGGTTTTAGCCGATGCCTTCTACTACACCAACGACAAAGGTGCCCGTGTATGGGTGTCTCCGCT GGATGTAGTGACCACAGAAAAAGACGATAAAGGCCGAGTCACCAAAGCCATCGATAAAGACGGTAACGAACTGGTTTACA CCGGTATGTGCAAGATGTCTAAGTCGAAAAACAACGGTATCGACCCACAGGTGATGGTAGAGAAATACGGTGCCGACACA GTTCGTCTGTTTATGATGTTCGCATCACCACCAGAATTAACTCTGGAATGGCAAGAGTCTGGCGTTGAAGGCGCACACCG CTTTATCAAACGTCTGTGGAAACTGGCCAGCGATTATGTGGCTCAGGACAACAGCGAAGCCTTAGACGTTAGCAAATTAA CTAGCGAGCAAAAAGCGCTGCGCCGTGAAGTACACAAGACCATCGCTAAGGTGACCGATGATATCGGCCGTCGCCAGATG TTCAACACTGCGGTTGCCGCCGTGATGGAACTGATGAACCACCTGCAAAAAGCGCCACAAACCACAGGTCAAGACCGAGC CATTATCGGTGAAGCTTTAACTGCGGTAGTGCGTTTACTGTACCCAATCATCCCACACGTGAGCTTTACCCTGTGGAACG AACTGGGCAACACCAACAGCATCGAAGACAGCCAATGGCCTGTTGTCGATGAATCTGCTCTGGTAGAAGACAGCAAACTC ATCGTGGTACAAGTGAACGGTAAAGTGCGCGCTAAGATCACTGTCGCTGCCGATGCTGACCAAGCGTCAGTGGAAGCGCT GGGTATGGCGGACGAGCAAGTCATCAAGTACTTAGATGGTGTTACGGTTCGTAAAGTTATCTATGTACCCGGTAAACTGC TCAGCATCGTTGCCAACTAA Protein sequence : MQEQYNPSEIEALVQKHWHDNKTFEVTEDANKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQGKNVLQPIGWD SFGLPAENAAINNKTAPAPWTYQNIEYMKNQLKLLGFGYDWSREIATCTPEYYRWEQWFFTKLYEKGLVYKKTASVNWCP NDETVLANEQVQDGCCWRCDTPVEQKEIPQWFIKITAYAEELLNDIDTLDGWPEQVKTMQRNWIGRSEGVEMTFGVAGSD KSFDIYTTRPDTLMGVTYVAIAAGHPLAELAAQTNPELAQFIEECKNSTTSEADLATMEKRGVATGLYAIHPITGKQVPI WAANFVLMNYGTGAVMSVPGHDQRDYEFAKKYNLPIEAVIKPVDGELDISEAAYTEKGVLFNSGEFDGLDFDGAFNAIAD KLVAEGKGKRQVNYRLRDWGVSRQRYWGAPIPMVTLADGTVIPTPEDQLPVILPEDVVMDGIQSPIKADKEWAKTQVNGQ DALRETDTFDTFMESSWYYARYCSPQADQMLDPTKANYWLPVDQYIGGIEHACMHLLYFRFFHKLLRDAGLVNSNEPAKQ LLTQGMVLADAFYYTNDKGARVWVSPLDVVTTEKDDKGRVTKAIDKDGNELVYTGMCKMSKSKNNGIDPQVMVEKYGADT VRLFMMFASPPELTLEWQESGVEGAHRFIKRLWKLASDYVAQDNSEALDVSKLTSEQKALRREVHKTIAKVTDDIGRRQM FNTAVAAVMELMNHLQKAPQTTGQDRAIIGEALTAVVRLLYPIIPHVSFTLWNELGNTNSIEDSQWPVVDESALVEDSKL IVVQVNGKVRAKITVAADADQASVEALGMADEQVIKYLDGVTVRKVIYVPGKLLSIVAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| leuS | YP_281511.2 | leucyl-tRNA synthetase | Not tested | Not named | Protein | 4e-162 | 43 |
