|
Name : Mmc1_0931 (Mmc1_0931) Accession : YP_864855.1 Strain : Magnetococcus marinus MC-1 Genome accession: NC_008576 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1142232 - 1143887 bp Length : 1656 bp Strand : + Note : PFAM: type II secretion system protein E; general secretory system II, protein E domain protein; KEGG: bbr:BB0781 type II secretion system protein DNA sequence : ATGAACGATCAGCCGCGTAAAAAACCCATTGGTGTGCTGCTGCAAGAGAAGGGTTTGATCTCCGATGCCCACATCGGTCT GGCTTTGCAGGATCAGAAAATCACAAAAGAGCGGGTGGGTGAAATTCTTGAGCGGTTGGGCTTTGTCTCCCAGTACGATG TGGCCACCACCATCTCGGAGCAGGAGGATCGCCCCTATCTGGATATTAACGCGGTACGCCCAGCGGAGGAGAGCCTGCGG CTGTTTAACCGCAATATCTGCGAACAAAACGATTTTTTGCCCATGCGCCATGATACCCAAGCCGGGGCCATTGAGTGCGT AACCGCCGCAGATGATGTGGTGGCCCTGGATAAATTGATTACCCGCCATACCGGTTTAAAGCCCTTCTTTTACCAGGGGG AAAAGGGCAAAATCCGCAATGCGGTGCAGTACTATTACTATTTTCTGGAAAACCCGGTGGAGAAGTTGCTGGAGCGGGAA ATCCAGTTGCTTAGTATGGATAAGGATGATGTGCGCAATCTGGATAACTTTGTGGCGCATCTTTTTCAGTTGGCGGTTAA AAACCGCGCCTCGGATATTCATATACGCCCCATGGACCGGGCGATTAACATCGCCTTTCGTATTGACGGTGTGTTGCGTC CCATGTTTTCCCTGCCCCCCAGCATGAAACGGGTGATTACCACCCTGAAGATGCGGGCGGATATGGATATTGCCGAGCAG CGTCTGCCCCAGGATGGGAGCTTTGGTGAGACCATTTTGACCAACCACTATGATTTTCGGGTCTCCACCACGGTTTGCCC CTATGGGGAAAATATGGTGATGCGTCTGTTGCCCGCCAAGAGCGACTTTATGGGCCTGCCCCAGTTGGGTTTTGAACCCG ACGATATTGAGCTGGTGCGGCAGATTTTTAACGAACCCTATGGCATTGTGCTGCTGACTGGGCCGACCGGATCGGGTAAG ACCACGACGCTGTATGCGGCGGTGCGGGCGTTAAACTTGACCGAAAAGAATGTGATGACGGTGGAAAACCCCATCGAATA TCGTATTCCCTTGATGCGCCAGACCCAGATTAATACCAAGGCTGGTTACACCTTCTCCAGCGCCATTCGCCACTTTTTGC GGCATGATCCAGATGTTATCTTGGTGGGGGAAATTCGCGATAAAGAGACCGCCGAAACCGCCATCTCCGCCTCGGAGACC GGCCACTTGGTGCTCTCGACCTTGCACACCAACACCGCCTTTGGTGCGTTGCCCCGTTTGCGTTCGCTGGGGATCCCGCC CTTTATGTTGGCCGATTCTTTGGTTGGGGTGGTGAGTCAGCGTTTGGTCCGTAAAATTTGCCCCACGTGCAAAGAGGCCT ATACCCCCAGTCAGGAGGAGTTGGACTACCTCAAGATTGAGGGGTTGGATACCCTCTACCGGGGGGTGGGGTGTGAAACC TGCTTTGGGACAGGTTTTCATGGTCGTACCTTGGTCTATGAGGTGCTACGTTCGTTCCCCGCCTTGGCGGTTGCCATTGG TAATGATGCGACCTTGGATGAGATGCGCCATATTGCGGTAAGCAATGGGTATCGTGAGATTGAGACCTGTGCCCACGCCA AGCTGGTGCGGGGAGATGTCTCCCTGTCAGAAGTGGTGCGGGTGCTGGGTTATTAA Protein sequence : MNDQPRKKPIGVLLQEKGLISDAHIGLALQDQKITKERVGEILERLGFVSQYDVATTISEQEDRPYLDINAVRPAEESLR LFNRNICEQNDFLPMRHDTQAGAIECVTAADDVVALDKLITRHTGLKPFFYQGEKGKIRNAVQYYYYFLENPVEKLLERE IQLLSMDKDDVRNLDNFVAHLFQLAVKNRASDIHIRPMDRAINIAFRIDGVLRPMFSLPPSMKRVITTLKMRADMDIAEQ RLPQDGSFGETILTNHYDFRVSTTVCPYGENMVMRLLPAKSDFMGLPQLGFEPDDIELVRQIFNEPYGIVLLTGPTGSGK TTTLYAAVRALNLTEKNVMTVENPIEYRIPLMRQTQINTKAGYTFSSAIRHFLRHDPDVILVGEIRDKETAETAISASET GHLVLSTLHTNTAFGALPRLRSLGIPPFMLADSLVGVVSQRLVRKICPTCKEAYTPSQEELDYLKIEGLDTLYRGVGCET CFGTGFHGRTLVYEVLRSFPALAVAIGNDATLDEMRHIAVSNGYREIETCAHAKLVRGDVSLSEVVRVLGY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-68 | 42 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-68 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mmc1_0931 | YP_864855.1 | type II secretion system protein E | VFG1876 | Protein | 7e-68 | 42 |
| Mmc1_0931 | YP_864855.1 | type II secretion system protein E | VFG2048 | Protein | 2e-69 | 42 |
| Mmc1_0931 | YP_864855.1 | type II secretion system protein E | VFG0182 | Protein | 3e-69 | 42 |
