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Name : Mmc1_0340 (Mmc1_0340) Accession : YP_864272.1 Strain : Magnetococcus marinus MC-1 Genome accession: NC_008576 Putative virulence/resistance : Virulence Product : two component, sigma54 specific, Fis family transcriptional regulator Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG2204 EC number : - Position : 392443 - 393855 bp Length : 1413 bp Strand : - Note : PFAM: response regulator receiver; sigma-54 factor, interaction domain-containing protein; helix-turn-helix, Fis-type; SMART: AAA ATPase; KEGG: vpa:VP2099 LuxO repressor protein DNA sequence : ATGATGAAAGCGCGTGATCTACATAGCCTGCTGTTGGTTGAAGATAGCCCCTCTATGGCGATGGTCTATCAAGAGTACAT CAAAGGGGAGCCACAGTGGCAGGTGAGCCACTGTAAAGAGGGTCATGCCGCGCTGGTCTATCTGCACCAGCATACGCCTG ATCTGGTTTTATTGGATCTGCAACTGCCCGACATGCATGGTTTAGAGATTCTCAAGGCGATCCATGAGCAGCAGCTACCT ACGCAAGTGGTGATCATCACCGCCCATGGCAGCGTGGACACCGCCGTGGAAGCTACCCGTTTGGGTGCTTTTGATTATCT AGAAAAACCCTTCTCAGCCAACCGCTTGCTGGTCACCATGGGCAATGCCCTGCGCCAGAAAAATTTATCCCTGGAGGTAC AAGCCTACCGGGATAGTTTTGACCGGGACCACTACCACGGTTTTATTGGGGCATCCCCTACCATGCAAGCGCTCTATCAA ACCATCGAGAGTGCGGCACCCAGCTCGGCCACCATCTTTATTACCGGAGAGTCCGGTACCGGCAAGGAGGTGTGCGCCGA GGCCATTCACAAGGCCTCGACCCGCCGCAACCGTCCCTTTATTCCCGTCAACTGCGCCGCCATACCCAAAGATTTGATGG AAAGCGAGCTGTTTGGCCATGTCAAAGGCTCCTTTACCGGGGCACTCTCGGACCGACAGGGTGCCGCCCAACGCGCCCAC CATGGCACACTATTTTTAGATGAGATCGGTGAACTGCCCCTGGATCTACAAAGTAAGCTGTTGCGGTTTTTACAGACCGG TCAGGTGCAAAAGGTCGGTGCGCAAAAGGGTGAGGTGGTGGATGTGCGCATTCTATGTGCCACCAATCGAGACCCCTGGG AAGAGGTTCAGGAGGGGCGTTTTCGCGAGGACCTCTACTACCGCCTTAATGTGATCCCCCTCCACCTACCCCCGCTACGC AAGCGGGATCAGGATGTGCTATTACTGGCCCATCATCTGTTGCAACAGTACAGCCGTGAGGAGAAAAAGGGCTTTACCCG CTTTAGTGGTGAGGCTGAACAACTCATCTTAGGGCACCGTTGGCCGGGCAATGTGCGGGAGCTGCAAAATGTCATTCGCC ATGCGGTGGTGCTCAATGATGGCACACTGCTCGAAGCGGCTATGCTGCCGCCACCGGTCGGGGGCAGCATGGGGAGGCAC ATGACGGTGCCCCCCCAAAACAAGATGCTCCTGCAAGAGGGCGCTACCGATGATGAGATCCTGCCCTTGTGGGTCGAGGA GAAACGCATCATCGAGCGGGCCTTAAAACAGTGTGGGGATAATATTCCCCAGGCCGCCGCCCGCTTGCAGATTAATCCTT CTACCATCTACCGCAAAAAGCAGTTATGGAAAAGCCGTGAGGAGGAAGCGTAG Protein sequence : MMKARDLHSLLLVEDSPSMAMVYQEYIKGEPQWQVSHCKEGHAALVYLHQHTPDLVLLDLQLPDMHGLEILKAIHEQQLP TQVVIITAHGSVDTAVEATRLGAFDYLEKPFSANRLLVTMGNALRQKNLSLEVQAYRDSFDRDHYHGFIGASPTMQALYQ TIESAAPSSATIFITGESGTGKEVCAEAIHKASTRRNRPFIPVNCAAIPKDLMESELFGHVKGSFTGALSDRQGAAQRAH HGTLFLDEIGELPLDLQSKLLRFLQTGQVQKVGAQKGEVVDVRILCATNRDPWEEVQEGRFREDLYYRLNVIPLHLPPLR KRDQDVLLLAHHLLQQYSREEKKGFTRFSGEAEQLILGHRWPGNVRELQNVIRHAVVLNDGTLLEAAMLPPPVGGSMGRH MTVPPQNKMLLQEGATDDEILPLWVEEKRIIERALKQCGDNIPQAAARLQINPSTIYRKKQLWKSREEEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00300 | YP_008207765.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR25 | Protein | 7e-58 | 41 |
| BJAB0868_00304 | YP_008211630.1 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | Not tested | AbaR26 | Protein | 7e-58 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mmc1_0340 | YP_864272.1 | two component, sigma54 specific, Fis family transcriptional regulator | VFG1249 | Protein | 2e-58 | 46 |
