Gene Information

Name : Mmc1_0272 (Mmc1_0272)
Accession : YP_864205.1
Strain : Magnetococcus marinus MC-1
Genome accession: NC_008576
Putative virulence/resistance : Virulence
Product : flagellar protein export ATPase FliI
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.15
Position : 310103 - 311452 bp
Length : 1350 bp
Strand : +
Note : KEGG: pca:Pcar_1189 probable flagellum-specific ATP synthase (FliI); TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+-transporting two-sector ATPase, alpha/subunit beta, central region; H+-transporting two-sector ATPase, a

DNA sequence :
ATGATCTCCATGGCACAGACGCCGACGGAAGAGCATCCCCTTAGGCTACCCTGGGGTGCTTATGCGCAGGTGGCGCAGGA
AGATCTGGGTTTTCACCGCTTGGGTTGGGTAAAAAAGGTGGTGGGATTGCTTATTGAAGGCAATGGTCCAGCGGTCTCCA
TTGGTCAGATGTGCGATGTCGTTCGTGAGAATGGCGAGGTGGTTAAGGCCGAGGTGGTGGGTTTTCGGGACAAGTCGGTA
TTGTTGATGCCGCTGGGTTCTATTAAGGGGATCTTTCCGGGTTCGCGGATTATCTCCCAGGGTCGAGCGGAGCAGGTACC
GGTGGGGCCGCAGTTGCTGGGTCGGGTGATTGGACCCATGGGCGAGGCATTGGATGGTCACGCCTTACCCCATTTGGATG
ATCATGTACCCCTGCATGCCGCGCCGATCAATCCCATGTTGCGGCGCAAGATTGAGGAGCCTTTGGATCTTGGGGTGCGG
GCGGTTAACAGTCTGCTTACCGTGGGTCGGGGCCAGCGTTTGGGTATTTTTGCCGGAACCGGTGTGGGCAAGAGCACCCT
GTTGGGTATGATGGCCCGCTATACGGCGGCGGATATTAATGTGATTGCCCTGATCGGTGAACGTGGGCGCGAGGTGGTGG
AGTTTATTGAGGATGAGTTGGGCCCTGAGGGCATGGCGCGTTCCATTGTGATTGTCGCCACCTCGGATCAACCTCCGTTA
TTGCGTTTGCGGGCGGCGTATATGGCAACGGCCATTGCCGAGTTTTTTCGTGCCCAGCAAAAGGATGTGCTGTTGTTGAT
GGACTCCATTACCCGTTTTGCCATGGCGCAGCGGGAGGTGGGTTTGGCCACCGGCGAGCCCCCTACCAGTCGTGGTTATC
CACCCTCAACCTTTATGCTGTTGCCCCGCCTGTTGGAGCGGGGGGGACGGGATCAAGGGCGTGGTTCGATTACTTCCATC
TATACGGTGTTGATGGAAGGGGATGATATTCAGGATCCCATTGTTGACGCGGTACGGGGTATTTTGGATGGTCACATTGT
GTTGTCGCGGGATCTGGCGGCGGCCAACCACTACCCCGCCATTGATGTCAACGGTTCGTTGTCGCGTTTGATGGAGGGGC
TGTCGGAGAAGGCGCATAAACGGGCTGCCGGTCAACTACGGGAAATTTTGGCCACCTATGTTAAGGCCGAGGATATGATT
AATATTGGTGCCTATGTGGCGGGCAGTAACCCGCGCATTGACCGGGCCATTCGGTTTATTGAGCCCATACGTACCTTTTT
GAAGCAGTCGGTGGAGGAGCCCTCGACTTTGGAAGAGAGCATCGCTCAGTTAGAGAGTCTGTTCGCCTAA

Protein sequence :
MISMAQTPTEEHPLRLPWGAYAQVAQEDLGFHRLGWVKKVVGLLIEGNGPAVSIGQMCDVVRENGEVVKAEVVGFRDKSV
LLMPLGSIKGIFPGSRIISQGRAEQVPVGPQLLGRVIGPMGEALDGHALPHLDDHVPLHAAPINPMLRRKIEEPLDLGVR
AVNSLLTVGRGQRLGIFAGTGVGKSTLLGMMARYTAADINVIALIGERGREVVEFIEDELGPEGMARSIVIVATSDQPPL
LRLRAAYMATAIAEFFRAQQKDVLLLMDSITRFAMAQREVGLATGEPPTSRGYPPSTFMLLPRLLERGGRDQGRGSITSI
YTVLMEGDDIQDPIVDAVRGILDGHIVLSRDLAAANHYPAIDVNGSLSRLMEGLSEKAHKRAAGQLREILATYVKAEDMI
NIGAYVAGSNPRIDRAIRFIEPIRTFLKQSVEEPSTLEESIAQLESLFA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-97 53
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-97 53
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 1e-97 53
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 1e-97 53
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 1e-96 53
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 8e-98 53
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 2e-96 53
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-96 52
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 9e-96 52
lscN AAO18044.1 LscN Virulence TTSS locus Protein 5e-97 51
escN YP_003223475.1 translocator EscN Virulence LEE Protein 1e-86 50
escN CAI43874.1 EscN protein Virulence LEE Protein 8e-87 50
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-85 49
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-85 49
escN AAC31513.1 L0034 Virulence LEE Protein 8e-86 49
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 8e-86 49
escN AAC38383.1 EscN Virulence LEE Protein 7e-86 49
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-83 48
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 2e-83 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 1e-82 47
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 4e-83 47
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-82 47
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 9e-83 47
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 6e-83 47
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 1e-74 47
escN CAC81862.1 EscN protein Virulence LEE II Protein 4e-87 47
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 4e-87 47
escN AAK26715.1 EscN Virulence LEE Protein 6e-87 47
escN AAL57542.1 EscN Virulence LEE Protein 6e-87 47
escN YP_003236088.1 translocator EscN Virulence LEE Protein 3e-86 47
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-79 46
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 2e-80 46
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 2e-80 46
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 2e-80 46
unnamed AAL06369.1 EscN Virulence LEE Protein 5e-85 46
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 4e-80 46
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 2e-80 45
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-84 44
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 2e-75 44
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 2e-75 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 8e-78 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 2e-77 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 1e-77 44
ysaN AAS66842.1 YsaN Not tested SSR-1 Protein 4e-68 41
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 9e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG1254 Protein 3e-105 53
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG0048 Protein 9e-101 51
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG2144 Protein 2e-100 51
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG0192 Protein 2e-98 51
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG2499 Protein 1e-97 51
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG0390 Protein 2e-96 50
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG2331 Protein 3e-101 49
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG0730 Protein 4e-86 49
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG0812 Protein 5e-86 49
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG0515 Protein 2e-83 47
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG2459 Protein 2e-71 42
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG1008 Protein 1e-70 42
Mmc1_0272 YP_864205.1 flagellar protein export ATPase FliI VFG1778 Protein 5e-69 42