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Name : Mmc1_2541 (Mmc1_2541) Accession : YP_866447.1 Strain : Magnetococcus marinus MC-1 Genome accession: NC_008576 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 3231760 - 3233994 bp Length : 2235 bp Strand : + Note : KEGG: pfo:Pfl_3001 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein; DNA topoisomerase, type IA, Zn finger domain protein; SMART: DNA topoisomerase I, ATP-binding; DNA t DNA sequence : ATGATTCTCTATCTTTGCGAAAAGCCCTCTCAGGGTCGGGATATTGGCCGCGTTTTAGGGGCTACCAGCCGTCATGAAGG TTATGTGGCAGGAGCAGGGGTGTGCGTAACTTGGTGTATTGGTCATCTTATGGAGATGGTGGCCCCTGATGGTTATAGAC CCGAATGGAAAAGTTGGCGGCTGGATACCCTACCCATCATTCCCCAACAGTGGCAGCTGGAGCTCACCGCCCGTGGGCGC AAGCAGTTTAAGGTTATCCAAGGGTTACTCAAGGGTGTAACGGAGGTGGTGCTCGCCACCGACGCCGACCGCGAAGGTGA GACCATTGGCCGTGAAGTGTTGGAGCGCTGCCAATACCGGGGTAAGATCTCTCGCCTCTGGTTATCTGCCCTGGATGATG CCAGCATTCGCAAAGCGTTGGGCAACCTGCTACCAGGGGAGCAAACCGAGCCCCTCTACCAAGCCGGGCTTGGCCGATCT CGTGCGGATTGGATGGTTGGGATGAACCTTACCCGCGCCTATACCCTTTTGGGTCGGCAGGGGGGCTATGCAGGGGTGTT GAGCGTGGGGCGCGTGCAAACCCCCACCCTAAAACTGGTGGTGGACCGGGACCGGCTGATCGAGAACTTTAAACCCGTCG ACTATTTTGAGATTTTTGCCTTACACCGCGTTCACTCAGGGACGTTCATCGCCAAATGGGTACCGCCCCCTAAGCCTTGC GATGCCGAGGGTCACTGCTTGGACCGCACCCTCGCCGAAACGGTCATACACAAGGTGCAAGGCCACAGCGGCACCATTAC AAAAGCCGAGACCAAGCGCGTCAAAGAGCCGCCCCCGCTGCCATTGGAGCTCTCGACTCTGCAACAAGAGGCTTCGCGGC GCTGGGGCATGGGTGCCAAACAGACCCTTGAGATTGCCCAATCCCTTTATGAAAAGCATAAAGCGGTGACCTATCCCCGC ACCGATTGCCGTTATCTACCCAGCAACCAGTTTAAAGAGGCCCCGGCGGTACTACAGGGATTGACAACCAACGATGCCAG CCTCACCCCCTTGGTGGAGGGTGCAGATGCACAGCTCCGCTCCAAGGCGTGGAACGACAAAAAAATCACCGCTCACCATG CCATCATTCCAACCGCCGCCAAGATAAACATCGACGCCCTCAGCCGCGAAGAGGCTCTGCTGTATGATCTGATTCGCCGT CACTACTTGGCGCAATTTTACCCCCCCTTCGAGTATGACCGCACGGTAATCGACACCCAGGTCGCCATGGAAACATTCCA CGCCACAGGCCGGGTTGAGCTCATTCCAGGGTGGAAAAGGGTGCTGGCTGCCAACCAAGAAAAAAAAGAGGGCGACGAGG ATGAGCAAACGTTACCCGTGGTACGCAGCGGCGAAGCTGCCACCATTGAGGGGGCTGAACTGAAACAAAAGCAGACCAAG CCTCCCAACCGTTATACCGAAGGCACCTTAATCCAGGCGATGAAAAGCGTCGGCAAGCTGGTCGAAGATGCCCGTCTACG CAAGATTTTAAGAGAGACCTCGGGCATTGGCACAGAGGCCACCCGTGCCGCCATTCTGGAGACCTTGATTAAACGCAATC TGCTGGCCAAGCAGGGCAAAAAAAGTCTTGTTAGCATGCCCGCCGGTCGTCTGCTGGTGGATGCCCTACCCCATAGCGTC ACCGACCCCGCCACCACCGCAGTCTGGGAACAGACCCTGGATGATATTGCCCATGGTGGAGGATCGCTGGAGACCTTTTT AGCCAAATCCGAGTTATGGCTTAATAAGCTTATTCACAATGTTCACCAACGCCAGCAGCTGGGACTAAACCCCTTTCGAG GTCTCCCCCCTTCCACGTCGCATACCGACCCAGCCCAGCCCACTCCGCGCAGGCAACGCCGCTCTAAAGCAGAGGTCACA CCCACCCCAAACGCCGCCCCCCTGTGCCCCCAGTGTGGCGGGCCTATGTTACAGCGTAAAAGCCCGCAAGGCGCTTTTTG GAGCTGTGCAGAGCAAGCAACCTGTACGGGCACACGGCCAGGGAGCCCCCTTGCAGCCCACTCGCCCCTTATGCAACCCA ACCCAGAGCGCGGACCTCTTTGCCCCAAGTGCCAACAAGCCCCCCTGGTACAGCGCACCGCCTATCGCGGCAAAAATAGC GGCCAACCTTTCTGGGGCTGCCAGCGTTACCCCCAGTGCCGCTACACCCAAGCCAGCCAAACCACAGAGTCATAA Protein sequence : MILYLCEKPSQGRDIGRVLGATSRHEGYVAGAGVCVTWCIGHLMEMVAPDGYRPEWKSWRLDTLPIIPQQWQLELTARGR KQFKVIQGLLKGVTEVVLATDADREGETIGREVLERCQYRGKISRLWLSALDDASIRKALGNLLPGEQTEPLYQAGLGRS RADWMVGMNLTRAYTLLGRQGGYAGVLSVGRVQTPTLKLVVDRDRLIENFKPVDYFEIFALHRVHSGTFIAKWVPPPKPC DAEGHCLDRTLAETVIHKVQGHSGTITKAETKRVKEPPPLPLELSTLQQEASRRWGMGAKQTLEIAQSLYEKHKAVTYPR TDCRYLPSNQFKEAPAVLQGLTTNDASLTPLVEGADAQLRSKAWNDKKITAHHAIIPTAAKINIDALSREEALLYDLIRR HYLAQFYPPFEYDRTVIDTQVAMETFHATGRVELIPGWKRVLAANQEKKEGDEDEQTLPVVRSGEAATIEGAELKQKQTK PPNRYTEGTLIQAMKSVGKLVEDARLRKILRETSGIGTEATRAAILETLIKRNLLAKQGKKSLVSMPAGRLLVDALPHSV TDPATTAVWEQTLDDIAHGGGSLETFLAKSELWLNKLIHNVHQRQQLGLNPFRGLPPSTSHTDPAQPTPRRQRRSKAEVT PTPNAAPLCPQCGGPMLQRKSPQGAFWSCAEQATCTGTRPGSPLAAHSPLMQPNPERGPLCPKCQQAPLVQRTAYRGKNS GQPFWGCQRYPQCRYTQASQTTES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-146 | 48 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 3e-146 | 48 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-146 | 48 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 3e-144 | 47 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 2e-136 | 47 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 3e-140 | 46 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-130 | 46 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 1e-131 | 45 |
