Gene Information

Name : Mmc1_2140 (Mmc1_2140)
Accession : YP_866047.1
Strain : Magnetococcus marinus MC-1
Genome accession: NC_008576
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : 1.11.1.5
Position : 2624621 - 2625121 bp
Length : 501 bp
Strand : -
Note : PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; KEGG: hch:HCH_01604 peroxiredoxin

DNA sequence : 
ATGGCTCAGATCACGTTGAAGGGTAACCCCATCCATACCAATGGCGACTTGCCTTCCGTAGGTAGCGCTGCCCCAGATTT
TGTACTGACTGGCACCGATCTGAAAGAGGTTAGCCTCAAGGATTATGCAGGCAAAAAAGTTGTACTGAATATCTTTCCTA
GCCTAGACACCCCTGTGTGTGCGGCGTCGGTTCGTCAGTTCAACAGCAATGTGGACAAGATGGAAAACACGGTGGTGTTG
TGTATTTCCCGCGATCTGCCTTTTGCGCACAAACGCTTTTGTGAGACCGAAGGTCTGGCCAGTGTTGCAGGCATGAGCGA
ACTGCGTGTGGTTGAATTTGGCGAAGCCTATGGCGTGCGCATCGTTGATGGTCCTTTGGCCGGTTTGTGTGCTCGTGCGG
TGGTGATCTTGGACGAAACAGGCAAAGTTGTTTACACTCAGCAGGTGCCTGAGATTGTAGAAGAGCCCAACTATGAAGCT
GCCTTGGCTGCTTTAAAATAA

Protein sequence : 
MAQITLKGNPIHTNGDLPSVGSAAPDFVLTGTDLKEVSLKDYAGKKVVLNIFPSLDTPVCAASVRQFNSNVDKMENTVVL
CISRDLPFAHKRFCETEGLASVAGMSELRVVEFGEAYGVRIVDGPLAGLCARAVVILDETGKVVYTQQVPEIVEEPNYEA
ALAALK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 6e-33 44
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 4e-33 44
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-32 43
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 8e-33 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmc1_2140 YP_866047.1 thiol peroxidase VFG0087 Protein 2e-33 44