Gene Information

Name : Mmc1_2117 (Mmc1_2117)
Accession : YP_866024.1
Strain : Magnetococcus marinus MC-1
Genome accession: NC_008576
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 2595431 - 2596189 bp
Length : 759 bp
Strand : -
Note : KEGG: pca:Pcar_1946 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence : 
ATGTTTTCTCCCCAACGGGCACCCAGAGTGCTTGCGGTGATCCCCGCGCGCTGGGCCTCTAGCCGGTTTCCTGGCAAACC
ACTGGTTGAGATCGCAGGTAAAATTATGATCCAGCGGGTGTGGGAACAAGCCAGCCGCGCGGCATGTGTGGATGCTGTTG
TGATCGCAACCGATGATGCGCGGATTGAACAGGCCTGCCATGCGCGGGGCATGCCGGTGGTGATGACCCGGGATGACCAT
CCCACCGGTACGGATCGTCTAGCCGAAGTGGCACAGCAGCAAGAAGCGGATATTTACCTCAATGTGCAAGGGGATGAACC
GCTCATTAATCCTGATACCATTGATGCGGTTGCCCAGTGCTTGTTGGATGCACTACCTCGAGGAATTGGTCTGGCGACGG
CCTATATGGATGGAGCCAGCCAAGCGCAAAAAGCATCGCCTTCCACGGTGCATCTGGTACCGTCCATGGATGGCTGTGTG
ATTACATTCAGCCGTCTGCCCGTGCCACTTGATTTTCAGGCGAGCTTTGACCATAAAGTCCACGTGGGGCTCTACGCTTT
TACCCGGGATGCCTTAATGGAATTTGTCGCCTTGGAGCGGGGGCCTGTAGAGCGTGCGGAGAGCATCGAGCCCTTGCGCT
TTATTGAGCGGGGAAAACGTATTGCCTGTGTTAAGGTGCCGGGAGGATCTGTGGGGGTGGACCACCCCGAAGATGTGACC
CGCGTAGAAGCGCTCTTAAAGCGCCATGGGTTAGCCTAG

Protein sequence : 
MFSPQRAPRVLAVIPARWASSRFPGKPLVEIAGKIMIQRVWEQASRAACVDAVVIATDDARIEQACHARGMPVVMTRDDH
PTGTDRLAEVAQQQEADIYLNVQGDEPLINPDTIDAVAQCLLDALPRGIGLATAYMDGASQAQKASPSTVHLVPSMDGCV
ITFSRLPVPLDFQASFDHKVHVGLYAFTRDALMEFVALERGPVERAESIEPLRFIERGKRIACVKVPGGSVGVDHPEDVT
RVEALLKRHGLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 3e-34 43
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-34 43
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-34 43