|
Name : Mmc1_1979 (Mmc1_1979) Accession : YP_865887.1 Strain : Magnetococcus marinus MC-1 Genome accession: NC_008576 Putative virulence/resistance : Virulence Product : RNA-directed DNA polymerase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3344 EC number : - Position : 2455836 - 2457089 bp Length : 1254 bp Strand : - Note : PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron, maturase-specific domain protein; KEGG: plu:plu1111 hypothetical protein DNA sequence : ATGAATGCGACAAAGGCTTTTGATATACCGAAAGAGTTAGTGTGGCAGGCCTATCTGGATGTGAAACGAAGTTCAGGAGG GCCTGGCCTTGATGGTCTAACGATGGAGGCATTTGAAGAAGATTTGAAGAATCAGCTGTATAGGTTATGGAACCGAATGT CGTCGGGCAGCTACTTTCCACCACCTGTCATGCGGGTAGAAATCCCCAAATCAGATGGTGGTGTGCGAGGGCTGGGTATT CCGACGATTGGTGATCGTATCGCGCAAGCGGTTGTGAAACGATATCTGGAGCCATTGGTGGAGCCAAAATTCCATGAAGA CTCCTATGGATATCGTCCCAATCGCTCAGCTTTGGATGCCGTTAGACAGGCCCGCCAGCGCTGTTGGCGGGATGACTGGG TGCTTGATCTGGATATCAGCAAGTTTTTCGATAAACTGGATCATGCATTGGTAATGCGTGCGGTGAAGCGGTTTACAGAT TGTAAGTGGGTTCTGCTCTACATCGAGAGGTGGTTAAAAGCAGATGTTCAACTACAGGATGAGACCATCCTTCATCGGGA GATGGGAACCCCCCAGGGCGGTGTAATCAGCCCTCTGCTTGCAAACATTTTTCTGCATCTTGGTTTCGATCAGTGGATGA AGGAGAATTATCCTCACATTCATTTTGAGCGTTATGCCGATGATATTGTCGTGCATTGCCGTTCCTTGAAGCAGTTGCAG TGGATCAAGAAGAGGATTGAACAGCGCTTGAAGCTCTGCAAATTGTCTCTCAACGACAAAAAGACGCGAGTTGTCTATTG TAAAGATTCTCGTAGGTCAGGGGAGTGGACGTGTCAGAGCTTTGATTTTCTGGGCTATACCTTTCGTCCAAGGTCATCAC GCAACCACCGTGGAGAGCTTTTTGTAAGCTTTAGTCCGGCAATCAGTCGGAAAGCTTCGAAATCTCTACGGCAGACCATT CGGCGGGAGTGGAAGCTCCAAGCGAGGAGCCAGCACTCTATTGAGGAACTGGCAAGACGTTTAAATCCAGTGATCACAGG TTGGATAAACTATTATGGCCGATTCTGTCGATCGGAGATGCACTCTGTATTGGACCGGATAAACACCGCTCTTGCCTTCT GGGCAATGCGTAAGTTCAAGAAACTCCGTGGGCACAAGACCCGAGCGCACAAGTGGCTCAAAGGGGTTGCCCAGAGAGAG CCATCTTTGTTTGCGCATTGGAAATATCAGGGCTGGATGACAAGAGCCGTATGA Protein sequence : MNATKAFDIPKELVWQAYLDVKRSSGGPGLDGLTMEAFEEDLKNQLYRLWNRMSSGSYFPPPVMRVEIPKSDGGVRGLGI PTIGDRIAQAVVKRYLEPLVEPKFHEDSYGYRPNRSALDAVRQARQRCWRDDWVLDLDISKFFDKLDHALVMRAVKRFTD CKWVLLYIERWLKADVQLQDETILHREMGTPQGGVISPLLANIFLHLGFDQWMKENYPHIHFERYADDIVVHCRSLKQLQ WIKKRIEQRLKLCKLSLNDKKTRVVYCKDSRRSGEWTCQSFDFLGYTFRPRSSRNHRGELFVSFSPAISRKASKSLRQTI RREWKLQARSQHSIEELARRLNPVITGWINYYGRFCRSEMHSVLDRINTALAFWAMRKFKKLRGHKTRAHKWLKGVAQRE PSLFAHWKYQGWMTRAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13526.1 | reverse transcriptase | Not tested | PAGI-7 | Protein | 2e-106 | 50 |
| unnamed | CAD33771.1 | putative reverse transcriptase | Not tested | PAI I 536 | Protein | 1e-84 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mmc1_1979 | YP_865887.1 | RNA-directed DNA polymerase | VFG1512 | Protein | 6e-85 | 44 |
