|
Name : Mmc1_1971 (Mmc1_1971) Accession : YP_865883.1 Strain : Magnetococcus marinus MC-1 Genome accession: NC_008576 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4584 EC number : - Position : 2451131 - 2452252 bp Length : 1122 bp Strand : + Note : PFAM: Integrase, catalytic region; KEGG: nha:Nham_3914 integrase, catalytic region DNA sequence : ATGCTGACATTGGAGACGAGAGCAAAAATCAGACGGGATCGAGAGGTCCTGAAGAAGTCGATCAAGCAAATCAGCAGAGA TCGACATGTTTCGCGCAATACGGTGCGTAAGATATTGGAGGAAGAGCCAGGTCAGGAGATCGGCTACCAACGTTCGATTC AACCTCGGCCTCAACTTGGGCCGTATGTCGAAAGGTTGGAAAAGATTCTGGAAGCGGATTGGCCTCAGCCCCGCAAACAG CGTCTGCAAGCAAAGCAGATTTTTGAAACGTTGGCTTATGAGGGCTATCAGGGCGCATATGACAGCGTTCGCCGCTATGT AAAAGCATGGCGAACTGAAAAGGGAAGAAACCCAGGCACAGTATTTATCCCTCTCTACTTTGAGCCTGGATCAGCCTATC AGTTTGATTGGAGCTATGAGAGCGCCGTTCTGGGTGGAGTCCATCAAAGCATCAAGGTGGCCCATTTTCGCTTGGCTCAC AGCCGCATGATCTTTGTGGTCGCCTTCCTGCGGGAATCCCTGGAGATGCTTCTGGATGCGCATAACCGGGCTTTTAAGTT TTTTGGAGGTTGCCCCCACCAGGGTATTTACGACAACCTCTCGACAGCGGTGGATAAGATTCTCAAGGGCAAGGAGCGCA CATTTAATAGCCGCTTTGAGGCGATGTGCGATCACTTTTTGGTAGAGCCCGTAGCCTGTACGCCAGCAGCGGGTTGGGAG AAGGGCCAGGTAGAGAAACAAGTCCGGGATGTTCGCAACTGGTTTTTCAAACCCATTCCCCAGTTTGCTGATCTGGAAGA GTTGAATCACTGGCTTGCGGACCGCTGTTGGGGATGGGCGTCCACGCATCCTCACCCAGAACAGAAACAGCGCACAGTAG CCGCCGTGTTTCAACAAGAGCGGGAGCATCTGATCCGTTTCAGCCGCCCATTTGACGCTTATAAAGAGCGTGAGTGTCGC GTCTCATCGACCAGTCTGATTCAATATGACGGCAATCAATACAGCGTGGAGGCGATAGCCGCGCGCAAGGCCGTTACCAT ACGGGCCTATGCAGAACGAATCATGGTGATTCACAAAGGAAAAGTGGTTGCAGATCATCTGCGCAATCTGAGCAAGGGGT GA Protein sequence : MLTLETRAKIRRDREVLKKSIKQISRDRHVSRNTVRKILEEEPGQEIGYQRSIQPRPQLGPYVERLEKILEADWPQPRKQ RLQAKQIFETLAYEGYQGAYDSVRRYVKAWRTEKGRNPGTVFIPLYFEPGSAYQFDWSYESAVLGGVHQSIKVAHFRLAH SRMIFVVAFLRESLEMLLDAHNRAFKFFGGCPHQGIYDNLSTAVDKILKGKERTFNSRFEAMCDHFLVEPVACTPAAGWE KGQVEKQVRDVRNWFFKPIPQFADLEELNHWLADRCWGWASTHPHPEQKQRTVAAVFQQEREHLIRFSRPFDAYKERECR VSSTSLIQYDGNQYSVEAIAARKAVTIRAYAERIMVIHKGKVVADHLRNLSKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| istA | AAN62228.1 | putative transposase | Not tested | PAGI-3(SG) | Protein | 2e-83 | 50 |
| unnamed | AAN85144.1 | unknown | Not tested | Hrp PAI | Protein | 3e-62 | 43 |
