Gene Information

Name : Mmc1_1659 (Mmc1_1659)
Accession : YP_865574.1
Strain : Magnetococcus marinus MC-1
Genome accession: NC_008576
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2061661 - 2062551 bp
Length : 891 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: phage integrase family protein; phage integrase; KEGG: noc:Noc_2255 tyrosine recombinase XerD

DNA sequence :
ATGTCTGATTATCGCTTGATGGAACGATTTCTCGATGAGCTGCTCATTGAGCATGGTCTTGCGGCCAACACCCTGATAGC
CTATCGGCGCGACTTGGATGCTCTGCGCAGCTTTTGCGCCAGTCGCAACCTGACCCTGCCCGAGATCCAACGCCAGGATG
TTTTGGAGTATATTGGTGAGCTGGCACAAAAAAGCCTGACCCCCTCAACGGTAGCCCGCAAACTCTCCGCTATGCGGCGG
CTATTTCGGCATCTGGTGGATAAAGGTATTCGTAGCGAAGACCCCACCGGTGGTGTCTATCGACCTAAACCCCAACGAAA
ACTGCCCAACACCCTAAGCGAAGCGGAGACCGAAGCACTGCTCTATGCGCCGGATACCAGCACCGAATTGGGTATGCGGG
ATGCCGCCATGCTGGAGCTGATGTATGCTACCGGTCTACGGGTTTCGGAACTGGTTACGCTGACCCTGGACGGTTTGGAC
GAAGAGAATGGTTTTGTGCGGGTGATCGGTAAAGGCAATAAAGAGCGCATTGTACCCATGGGGGAGGCCGCCACCGAAAT
GGTGATCCGCTACCGGCACAGCGCCCGCCAAGTGTTGCTTAAAGGGGGGCGCTGTAATGACCTGTTTTTGAGCAATCGCG
GGGCCGCAATGACGCGGCATAATTTTTGGCACATTGTCAAACGCTATGCCTATGAGGCAAATATTATGAAACCGCTCTCC
CCACATGGTATCCGGCACGCCTTTGCCACGCACCTGCTCAACCATGGGGCTGACCTGCGGGCGGTACAGATGATGTTGGG
GCATGCCGATATTTCAACCACCGAAATCTATACCCACGTCGCCAATGCTCGTCTAAAAAAATTGCACGACCAACTGCACC
CTAGAGGATGA

Protein sequence :
MSDYRLMERFLDELLIEHGLAANTLIAYRRDLDALRSFCASRNLTLPEIQRQDVLEYIGELAQKSLTPSTVARKLSAMRR
LFRHLVDKGIRSEDPTGGVYRPKPQRKLPNTLSEAETEALLYAPDTSTELGMRDAAMLELMYATGLRVSELVTLTLDGLD
EENGFVRVIGKGNKERIVPMGEAATEMVIRYRHSARQVLLKGGRCNDLFLSNRGAAMTRHNFWHIVKRYAYEANIMKPLS
PHGIRHAFATHLLNHGADLRAVQMMLGHADISTTEIYTHVANARLKKLHDQLHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-60 47
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-60 47