Gene Information

Name : Mmc1_1493 (Mmc1_1493)
Accession : YP_865408.1
Strain : Magnetococcus marinus MC-1
Genome accession: NC_008576
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 1825910 - 1827181 bp
Length : 1272 bp
Strand : -
Note : PFAM: UDP-glucose/GDP-mannose dehydrogenase; KEGG: bbr:BB0876 polysaccharide biosynthesis protein

DNA sequence :
GTGAATAAAAATCCCAAAATTGCCATCATCGGCCTCGGTTATGTGGGTTTGCCCCTAGCTGTTGCCTTTGGGAAAAAATA
TCCCACAGTGGGCTTTGATATCCGCAGCCAACGCATTACCCAACTGCAACAGGGTCAAGACACCACCCTAGAGTGTAGCA
GCGTCGAGCTAGCGCAAGCCAGCCAGCTTAGTTTTACCGCTGATTTACAAGAAATTGCCCACTGCAACACCTACATTGTC
ACCGTACCCACCCCCATTGACAACTACCGCCGCCCGGATCTGAGCCCGCTGATAAGTGCCTCAGAAACCGTCGGCAAGGT
TCTTAAAGCGGGGGACGTGGTGATTTATGAATCCACGGTCTACCCCGGTGCCACCGAAGAGGTGTGCGTACCTATTTTGG
CCAAGCACTCCGGTTTGGTCTTTAACGAGACCTTTTTCGCAGGCTATAGCCCTGAGCGCATCAACCCAGGGGATAAGGTG
CATCGCCTGGAGACCATCACCAAAGTCACCTCTGGCTCAACAGCCGAGGCTGCTCAGTGGGTTGATCAACTCTATCAATC
CATCATTCAGGCGGGCACCCACCTAACCTCTTGCATCCGGGTGGCCGAGGCCGCCAAGGTGATTGAAAACACCCAACGGG
ATGTCAACATTGGCTTGATTAACGAGTTGGCCCTGCTCTTTAACCGCTTGGAGATCGACACCTTAGAGGTGTTGCAGGCG
GCAGGTACCAAGTGGAATTTTCTGCCCTTTAGGCCCGGCTTGGTGGGGGGGCACTGTATTGGGGTTGATCCCTACTATCT
GACCCATAAAGCCCAAGAGATTGGCTACCACCCGGATATGATTCTTGCTGGCCGCCGCGTCAATGACAGCATGGGCACCT
ATGTCGCCAGTGAAGTGATTAAGCTGATGACCCGCAAACATTTGTGTGTCGCCAGTTCGACCATTTTAATCTTGGGCCTA
ACCTTTAAGGAGAACTGCCCCGATCTGCGCAACACTCGGGTGGTGGATATTGCTCAAGAGCTTCTGGAATATGGGGCCGA
AGTGGCCATTTACGACCCCTGGGTGGATGCCCAAGAGGCGCACCATGAGTATGGCCTAAATTTGCTGACCGAGGTTCCCC
ATGCCCACTATGACGCGGTAATTTTGGCGGTACCCCATCGCCAATTTATCGAGGCGGGCATTGAGTGGGTCCAAGCCCTG
CGCAAAGAGATTTCGGTTTTCTACGACCTAAAATCGCTGTTTGCCAAAGAGCAGAGCGACCAACGCCTGTAA

Protein sequence :
MNKNPKIAIIGLGYVGLPLAVAFGKKYPTVGFDIRSQRITQLQQGQDTTLECSSVELAQASQLSFTADLQEIAHCNTYIV
TVPTPIDNYRRPDLSPLISASETVGKVLKAGDVVIYESTVYPGATEEVCVPILAKHSGLVFNETFFAGYSPERINPGDKV
HRLETITKVTSGSTAEAAQWVDQLYQSIIQAGTHLTSCIRVAEAAKVIENTQRDVNIGLINELALLFNRLEIDTLEVLQA
AGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQEIGYHPDMILAGRRVNDSMGTYVASEVIKLMTRKHLCVASSTILILGL
TFKENCPDLRNTRVVDIAQELLEYGAEVAIYDPWVDAQEAHHEYGLNLLTEVPHAHYDAVILAVPHRQFIEAGIEWVQAL
RKEISVFYDLKSLFAKEQSDQRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-130 63
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 5e-130 63
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 5e-112 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmc1_1493 YP_865408.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 2e-130 63