Gene Information

Name : Mmc1_0147 (Mmc1_0147)
Accession : YP_864080.1
Strain : Magnetococcus marinus MC-1
Genome accession: NC_008576
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 156172 - 158757 bp
Length : 2586 bp
Strand : -
Note : PFAM: ATPase AAA, central domain protein; Clp N terminal domain protein; ATPase associated with various cellular activities, AAA_5; ATPase AAA; SMART: ATPase AAA; KEGG: dsy:DSY1668 hypothetical protein

DNA sequence :
ATGAAACAGGAACAACTCACCAGCAAATCTGCTGAAGCCCTGAATAGCGCCGTCGGCCTCGCCGCCGAGCGCAACCACCA
ATTTGTCGAACCTGAACATCTGCTGCTGGCCATGCTTGAGCAAAAAGATGGGGTTATCCCTGCTCTCTTGATTAAAATGA
ATACCCCCCTGCCCGCTTTGCAACAGGCCACCAGCGTGGCGGTGGAGAATCTACCTCGGGTACACGGTGGGGGGGCTGCG
CAGACACTGCCCTCCCGGCGGCTACAAAGTTTGTGGCAAGATGCCGAGCGCGAAGCGGCAACCCTGCGCGATGACTACAC
CTCCACCGAACATTTTCTGCTGGCTATGACCGAACACAAAGAGGGGGCACTACCCTCCCTTTTACGCCCCTTTACCATTA
CCCGCACAAGGGTGTTGGAGGCCTTAAAAACCGTGCGCAGTGGGCAACGCGTCACCAGTAAAGAGCCTGAAGGAACCTTT
CAGGCCCTTGAAAAATATGCCCGTGACCTCACCGCGTTGGCAAAAAGCGGTAAATTGGATCCCGTCATTGGCCGCGATGA
GGAGATTCGCCGCACCATACAGGTGCTCAGCCGTCGCACCAAAAACAATCCGGTGTTGATCGGTGAGCCCGGTGTGGGTA
AAACCGCCATTGTGGAGGGGTTGGCGCTGCGTATGGAGCGGGGGGATGTGCCCGAATCCCTCAAGGGGGTGCGGGTGGTG
GCCCTGGATATGGGGGCGTTGGTGGCGGGTGCCAAATATCGGGGTGAGTTTGAAGAGCGCCTCAAAGCGGTCATCAAGGA
GGTGCAAGAGGCTCAGGGCAAGATCATTCTGTTCATTGATGAGATGCACACCATCGTTGGCGCTGGCCAAAGCGAAGGAG
CCATGGATGCAGGCAACCTGCTCAAGCCAGCCCTGGCGCGGGGTGATCTGCACTGTGTGGGGGCCACCACCCTGGATGAG
TACCGTAAACATGTGGAGAAAGATCCCGCCTTGGAGCGCCGCTTTCAACCGGTGCAGGTTCGCGAGCCTTCGGTGGAAGC
CACCATCTCCATTTTACGAGGCATTAAGGATAAGTATGAACTGCACCATGGGGTGCGCATTACCGATGCCGCCATTGTGG
CGGCGGCCACCCTTGCGCATCGCTACATCAGCGACCGTTTTCTCCCGGATAAAGCCATTGATCTGGTGGATGAAGCAGCG
GCCCGCATCCGCATGGAGATCACCTCCAAACCCCAGGTGTTAGACTCCCTTGATCGCCAGATCTTACAGCTACAGATTGA
GCAGTCTGCCCTGAGTAAGGAGAAGGATAGCGCCTCTCGCGAGCGCTTGACCAAGCTGGAGGCGGAGTTGGCGGATCTTA
AAGAGAATGCCCACGCCATGACCATACGCTGGGAGCAAGAGCGCCTTAACATCAAACAAGTGGGCATCCTTAAAGAGACG
TTGGAGTCAACCCGTCTCCAGTTGGAGCAGGCCGAACGCAGCGGCAATCTGGAAAAAGCGGGGGAGCTGCGCTATGGCAC
CCTACCCAAGCTGGAGCAGGAACTGCAAAAGGCCCAAGAGCTTGCCGCCCAGAGTCGTGAAAATCCACTCTTAAAAGAGC
TGGTGGATGAAGAGGAGATCGCCACCGTGGTGGCCCGCTGGACCGGCATTCCCGTGGCCCGCATGTTGGAAGGAGAGAAA
GACAAACTGCTCAAGATGGAGGAACGGTTGGGCCATCAGGTGGTAGGGCAGGAGCGGGCGCTCCAGGCCATTGCACGGGC
GGTCCGGCGGGCACGGGCCGGGTTGCAGGATAATAACCGTCCCATTGGTTCCTTCTTTTTTCTGGGTCCCACAGGGGTGG
GTAAAACCGAGCTGAGCAAAGCGTTGGCGCAGTTTCTGTTTAATGATGAGAGCGCCATGGTTCGCTTGGATATGTCCGAG
TATATGGAAAAACATACGGTGGCGCGGCTGATTGGTGCCCCGCCGGGTTATGTGGGCTATGAGGAGGGAGGCCAGCTCAC
CGAGCAGGTACGCCGCCGCCCCTACAGTGTGGTGTTGCTGGATGAGGTTGAAAAGGCCCATCCCGATCTGTTTAACACCC
TGCTCCAGGTGTTGGATGAGGGGCGCTTAACCGATGGTCACGGGCGTACCGTGGATTTTCGCAATACGGTCCTCATCATG
ACCTCTAACATCGGTTCCCATTTAATGGCAGAGGGCGGCCCCACGGCTCAGGTAGAGCATAGGGTTATGGAGCTACTTAA
ACAGACCTTTCGCCCGGAGTTTCTCAACCGATTGGATGAGATCATTCCCTTTCACGCCCTGCAACGTGAGCACATGGGCG
CCATTGTTGACATACAGCTTAAACGTCTGCACAAACTGCTGGATAAATTAAATATCCGTTTAGAACTGGAGCCTGCCGCC
CGCGCCGCCCTGGCTGAAGAGGGGTATGATCCCATCTATGGGGCACGCCCCTTAAAACGGGTTATGCAGCGCCTGGTCCA
AGACCCCCTGGCAGAGGCGATGCTCAGCGGTCATCTGCACGAGGGGGATCGGGTGGTCATCCACTTCGATGGGGAACAAT
TTGTGATAAATCCTGTTCACCGTTAA

Protein sequence :
MKQEQLTSKSAEALNSAVGLAAERNHQFVEPEHLLLAMLEQKDGVIPALLIKMNTPLPALQQATSVAVENLPRVHGGGAA
QTLPSRRLQSLWQDAEREAATLRDDYTSTEHFLLAMTEHKEGALPSLLRPFTITRTRVLEALKTVRSGQRVTSKEPEGTF
QALEKYARDLTALAKSGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRMERGDVPESLKGVRVV
ALDMGALVAGAKYRGEFEERLKAVIKEVQEAQGKIILFIDEMHTIVGAGQSEGAMDAGNLLKPALARGDLHCVGATTLDE
YRKHVEKDPALERRFQPVQVREPSVEATISILRGIKDKYELHHGVRITDAAIVAAATLAHRYISDRFLPDKAIDLVDEAA
ARIRMEITSKPQVLDSLDRQILQLQIEQSALSKEKDSASRERLTKLEAELADLKENAHAMTIRWEQERLNIKQVGILKET
LESTRLQLEQAERSGNLEKAGELRYGTLPKLEQELQKAQELAAQSRENPLLKELVDEEEIATVVARWTGIPVARMLEGEK
DKLLKMEERLGHQVVGQERALQAIARAVRRARAGLQDNNRPIGSFFFLGPTGVGKTELSKALAQFLFNDESAMVRLDMSE
YMEKHTVARLIGAPPGYVGYEEGGQLTEQVRRRPYSVVLLDEVEKAHPDLFNTLLQVLDEGRLTDGHGRTVDFRNTVLIM
TSNIGSHLMAEGGPTAQVEHRVMELLKQTFRPEFLNRLDEIIPFHALQREHMGAIVDIQLKRLHKLLDKLNIRLELEPAA
RAALAEEGYDPIYGARPLKRVMQRLVQDPLAEAMLSGHLHEGDRVVIHFDGEQFVINPVHR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-103 44
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 3e-103 41
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 2e-103 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Mmc1_0147 YP_864080.1 ATPase VFG2076 Protein 8e-113 46
Mmc1_0147 YP_864080.1 ATPase VFG2084 Protein 2e-106 45