|
Name : Mmc1_1449 (Mmc1_1449) Accession : YP_865364.1 Strain : Magnetococcus marinus MC-1 Genome accession: NC_008576 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1761348 - 1763954 bp Length : 2607 bp Strand : - Note : TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: csa:Csal_0621 DNA mismatch repair protein MutS DNA sequence : ATGAGCAGCCCCAAACAGACCCCCATGATCGCCCAGTATCTGAGCATCAAGGCCGCCCATCCGGAGACCTTGCTGTTTTT TCGTATGGGGGATTTTTACGAGCTGTTTTTTGACGATGCCAAACAAGCAGCTGAGGCATTGAACATTGCGCTTACCTCTC GCGGCAAGTCAGAGGGAGAGCCTATCCCCATGGCAGGAATCCCTGTCCATGCGCGCCAAACCTATTTAAACAAGCTGATT GAAGCCGGTTTTAAAGTTGCCATTTGTGAGCAGATGGAGCCACCGGGCGCCTCTAAAGGGCCGGTACGCCGCGAGGTGGT GCGCACTGTCACCCCTGGCACCCTAACCGAAGAGAGCCTGCTTAGCCCCCGCGAAAACAACTATCTGGTCAGTTATCTCC CCGCAGCCAAGCGTCACCCCCACGCTTTGGCTGCCCTGGATCTTTCCACCGGTGAGTTTTTTGCTCTGACCTTGGAAAGA GAAGATCAAGTCGCCGCTGAGCTGTCCCGCCTAGAGCCCGCCGAACTGCTGATCCCCGACAACTGGGAGCCAGAGCCATG GCTCAAGGGGTGGAAACGCTGTCTGTCGCGTCGAGGTTCCTGGTCTTTTGATGGCAAAGAGGGGGCCCGGGTCCTTTTAG AACATTTTCAGGTCACCAGTTTAGAAAGTTTTGGCGTGGCAGATAGTCCCCCCTGTTTAGGGGTGTGTGGTGCCCTCCTC CACTATTGCCGCGAAACCCAAAAAGAGGCGCTTTCCCATATCACTGGCTTGTCCCGCCTGCATCAGCAAGAGGGCATGGT GCTGGATGAAACCTGCCGTCGTAACCTAGAGCTTAACTATAACCTTAAGGATGGCAGCCGCAAAAGCAGCCTGCTTGGGG TGATGGATCGCTGTATTACCCCCATGGGTAGCCGTCTGCTGGCGCAGTGGATCAACCGTCCATTGCAATCTCTGGACGCC ATTGCCACCCGTCAAGAGAGCGTCTCCTGGTTGCGGGAAAATTTGGTTGCTTACCAGGATCTGCGTGAACGGCTGCGCAT GGTCCACGATCTGGAACGCTTTTTAAGCCGTATTGCGCTACGCCGGGCCAGCCCTCGGGATCTGGGAGGACTCCGCCAAA CGCTGCAATGTCTGCCCCAGCTCTACGCCATCCTTACCCCAGCTGACGGGCACAGCCTCGCGGTACCCAGCCTACTACGC ATCTTGGCCGACCATTTTAATGGCCACGAGGCGCTTACCAAGCAGCTTGAGCAGCAGTTGGCCGATGAGCTACCGTTAAA CCTTAAAGAGGGAGAGACCATTCGTCTGGGGTTTGATCAAACCTTAGACACCCTGCGCAGCCTCAGCCGCGATGGCAAAA GCTATCTTACCAAGCTGGAGGTAGAAGAGCGGGAGAAAACCGGCATCCCCTCGCTTAAAATCAAATACCATCGCAGCTTC GGTTACAGCATGGAGGTGACAAAAACCCATTTGGACAAGGTTCCCCCGCGCTATATCCAGCGTCAGACCATGACCAATGG TGTTCGTTATGTCACCGAAGAGCTTAAAGAGTATGAAGAGCAGCTGCTTACCGCCGAAGAGCGCATGTTAGAGCGAGAGC AGCTTCTGTTTGAAGCACTGGCCGAACAGGTTGCTCGCCAAGCCGAAACACTGCAAGCCAGCGCCCGTGCCATTGCCACC CTGGATGTCTTAGCCAATTTTGCGCACATTGCCGAGGAGCGCAACTATTGTCGCCCGCTGTTGCATGAGGGGGCGGTGAT TGAAATTAACCAGGGCCGGCATCCGGTGGTTGAACAGTTTTCCGACACCCCTTTTGTTGCCAACGATATACGCTTGGATA ACCGCCAGCGTACCGGCTTGATTACCGGTCCCAATATGGCGGGTAAATCCACCCTCATGCGTCAGGTTGCGCTCATTGTC CTGCTGGCCCACACCGGGGCGTGTGTACCGGCGGGTTCGGCTAAAATTGGGCGGGTGGATCGCATCTTCACCCGTGTTGG GGCGTCGGACGATCTGGCGGGGGGGCGCTCCACCTTTATGGTGGAGATGACCGAAACCGCCCACATTTTACACCATGCCA GCGAGCGATCTTTGGTGATATTGGATGAAATTGGCCGAGGCACATCCACCTACGATGGGCTCTCCATCGCCTGGGCGGTT GCGGAACACATCCACACCCAGTGCCAAGCCAGAACCCTATTTGCCACCCACTATCATGAGCTTACTCAGTTGGAGTCGCA ATTGGATGGGGTGTTTAATCTCACGGTGGAGGTTAAGGAGTGGAAAGATCAAATTCTCTTTTTGCACACCATTGTGCGGG GAGCGGCGGATCGTAGTTATGGTATTCATGTCGCCCAGTTGGCGGGACTACCCCGTGCCGTCACCCGCCGTGCGCGGGAG GTCTTGGCGGATTTAGAGGAACATGCCGTGCACCATCCAGATTCCATGGGGCAAGGCCACGCCCCTGCCTCCCAGCCCTA TCAGCTCACGCTTTTTGAGGATGCCCCACCCTCGCCAGCCTTATTGGAACTCAAGCGTGTCGATCCCGACGAATTGACGC CCAAAGAGGCGTTGGAAGCCCTTTATAGGCTCAAGGAGTTATTGTAA Protein sequence : MSSPKQTPMIAQYLSIKAAHPETLLFFRMGDFYELFFDDAKQAAEALNIALTSRGKSEGEPIPMAGIPVHARQTYLNKLI EAGFKVAICEQMEPPGASKGPVRREVVRTVTPGTLTEESLLSPRENNYLVSYLPAAKRHPHALAALDLSTGEFFALTLER EDQVAAELSRLEPAELLIPDNWEPEPWLKGWKRCLSRRGSWSFDGKEGARVLLEHFQVTSLESFGVADSPPCLGVCGALL HYCRETQKEALSHITGLSRLHQQEGMVLDETCRRNLELNYNLKDGSRKSSLLGVMDRCITPMGSRLLAQWINRPLQSLDA IATRQESVSWLRENLVAYQDLRERLRMVHDLERFLSRIALRRASPRDLGGLRQTLQCLPQLYAILTPADGHSLAVPSLLR ILADHFNGHEALTKQLEQQLADELPLNLKEGETIRLGFDQTLDTLRSLSRDGKSYLTKLEVEEREKTGIPSLKIKYHRSF GYSMEVTKTHLDKVPPRYIQRQTMTNGVRYVTEELKEYEEQLLTAEERMLEREQLLFEALAEQVARQAETLQASARAIAT LDVLANFAHIAEERNYCRPLLHEGAVIEINQGRHPVVEQFSDTPFVANDIRLDNRQRTGLITGPNMAGKSTLMRQVALIV LLAHTGACVPAGSAKIGRVDRIFTRVGASDDLAGGRSTFMVEMTETAHILHHASERSLVILDEIGRGTSTYDGLSIAWAV AEHIHTQCQARTLFATHYHELTQLESQLDGVFNLTVEVKEWKDQILFLHTIVRGAADRSYGIHVAQLAGLPRAVTRRARE VLADLEEHAVHHPDSMGQGHAPASQPYQLTLFEDAPPSPALLELKRVDPDELTPKEALEALYRLKELL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 1e-149 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Mmc1_1449 | YP_865364.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 1e-166 | 46 |
