Gene Information

Name : Shewana3_4318 (Shewana3_4318)
Accession : YP_863833.1
Strain :
Genome accession: NC_008573
Putative virulence/resistance : Unknown
Product : transposase Tn3 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4644
EC number : -
Position : 206336 - 209230 bp
Length : 2895 bp
Strand : -
Note : PFAM: transposase Tn3 family protein; KEGG: neu:NE0835 transposase Tn3 family

DNA sequence :
ATGCCACGTCGTTCCATCCTGTCCGCCGCCGAGCGGGAAAGCCTGCTGGCGTTGCCGGACTCCAAGGACGACCTGATCCG
ACATTACACATTCAACGATACCGACATCTCGATCATCCGACAGCGGCGCGGGCCAGCCAATCGGCTGGGCTTCGCGGTGC
AGCTCTGTTACCTGCGCTTTCCCGGCGTCATCCTGGGCGTCGATGAACTACCGTTCCCGCCCTTGTTGAAGCTGGTCGCC
GACCAGCTCAAGGTCGGCGTCGAAAGCTGGAACGAGTACGGCCAGCGGGAGCAGACCCGGCGCGAGCACCTGAGCGAGCT
GGCGATGCAAACCGACAAAGGCATCGTGCTGGCCAGCGCCTTGATCGGGCACCTGCGGCGGCAGTCGGTCATTCTGCCCG
CCCTCAACGCCGTCGAGCGGGCGAGTGCCGAGGCGATCACCCGTGCTAACCGGCGCATCTACGACGCCTTGGCCGAACCA
CTGGCGGACGCGCATCGCCGCCGCCTCGACGATCTGCTCAAGCGCCGGGACAACGGCAAGACGACCTGGTTGGCTTGGTT
GCGCCAGTCTCCGGCCAAGCCAAATTCGCGGCATATGCTGGAACACATCGAACGCCTCAAGGCATGGCAGGCACTCGATC
TGCCTACCGGCATCGAGCGGCTGGTTCACCAGAACCGCCTGCTCAAGATTGCCCGCGAGGGCGGCCAGATGACACCCGCC
GACCTGGCCAAATTCGAGCCGCAACGGCGCTACGCCACTCTCGTGGCGCTGGCCACCGAGGGCATGGCCACCGTCACCGA
CGAAATCATCGACCTGCACGACCGCATCCTGGGTAAGCTGTTTAACGCTGCCAAGAATAAGCATCAGCAGCAGTTCCAGG
CGTCAGGCAAGGCCATCAACGCCAAGGTACGTCTGTACGGGCGCATCGGTCAGGCGCTGATCGACGCCAAGCAATCAGGC
CGCGATGCGTTTGCCGCCATCGAGGCCGTCATGTCCTGGGATTCCTTTGCCGAGAGCGTCACCGAGGCGCAGAAGCTCGC
GCAACCCGATGACTTCGATTTCCTGCATCGCATCGGCGAGAGCTACGCCACCCTGCGCCGCTATGCACCGGAATTCCTTG
CCGTGCTCAAGCTGCGGGCCGCGCCCGCCGCCAAAAACGTGCTTGATGCCATTGAGGTGCTGCGCGGCATGAACACCGAC
AACGCCCGCAAGCTGCCAGCCGATGCACCGACCGGCTTCATCAAGCCGCGCTGGCAGAAACTGGTGATGACCGACGCCGG
CATCGACCGGCGCTACTACGAACTGTGCGCGCTGTCCGAGTTGAAGAACTCCCTGCGCTCGGGCGACATCTGGGTGCAGG
GTTCACGCCAGTTCAAGGACTTCGAGGACTACCTGGTACCGCCCGAGAAGTTCACCAGCCTCAAGCAGTCCAGCGAATTG
CCGCTGGCCGTGGCCACCGACTGCGAACAATATCTGCATGAGCGGCTGACGCTGCTGGAAGCACAACTTGCCACCGTCAA
CCGCATGGCGGCAGCCAACGACCTGCCGGATGCCATCATCACCGAGTCGGGCTTGAAGATCACGCCGCTGGATGCGGCGG
TGCCCGACACCGCGCAGGCGCTGATAGACCAGACAGCCATGGTCCTGCCGCACGTCAAGATCACCGAACTGCTGCTCGAA
GTCGATGAGTGGACGGGCTTCACCCGGCACTTCACGCACTTGAAATCGGGCGATCTGGCCAAGGACAAGAACCTGTTGTT
GACCACGATCCTGGCCGACGCGATCAACCTGGGCCTGACCAAGATGGCCGAGTCCTGCCCCGGCACGACCTACGCGAAGC
TCGCTTGGCTGCAAGCCTGGCATACCCGCGACGAAACGTACTCGACAGCGTTGGCTGAACTGGTCAACGCTCAGTTTCGG
CATCCCTTTGCCGGGCACTGGGGCGATGGCACCACATCATCATCGGACGGACAGAATTTCCAAACCGCTAGCAAGGCAAA
GAGCACGGGGCACATCAACCCAAAATATGGCAGCAGCCCAGGACGGACTTTCTACACCCACATCTCCGACCAATACGCGC
CATTCCACACCAAGGTGGTCAATGTCGGCCTGCGCGACTCAACCTACGTGCTCGACGGCCTGCTGTACCACGAATCCGAC
CTGCGGATCGAGGAGCACTACACCGACACGGCGGGCTTCACCGATCACGTCTTCGCCCTGATGCACCTCTTGGGCTTCCG
CTTCGCGCCGCGCATCCGCGACCTGGGCGACACCAAGCTCTACATCCCGAAGGGCGATGCCGCCTATGACGCGCTCAAGC
CGATGATCGGCGGCACGCTCAACATCAAGCACGTCCGCGCCCATTGGGACGAAATCCTGCGGCTGGCCACCTCGATCAAG
CAGGGCACGGTGACGGCCTCGCTGATGCTCAGGAAACTCGGCAGCTACCCGCGCCAGAACGGCTTGGCCGTCGCGCTGCG
CGAGTTGGGCCGCATCGAGCGCACGCTGTTCATCCTCGACTGGCTGCAAAGCGTCGAGCTACGCCGCCGCGTGCATGCCG
GGCTGAACAAGGGCGAGGCGCGCAATGCGCTGGCCCGTGCCGTGTTCTTCAACCGCCTTGGTGAAATCCGTGACCGAAGT
TTCGAGCAGCAGCGCTACCGGGCCAGCGGCCTCAACCTGGTGACGGCGGCCATCGTGCTGTGGAACACGGTCTACCTGGA
GCGTGCGGCGCATGCGTTGCGCGGCAATGGTCATGCCGTCGATGACTCGCTATTGCAGTACCTGTCGCCACTCGGCTGGG
AGCACATCAACCTGACCGGTGATTACCTATGGCGCAGCAGCGCCAAGATCGGCGCGGGGAAGTTCAGGCCGCTACGGCCT
CTGCAACCGGCTTAG

Protein sequence :
MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDISIIRQRRGPANRLGFAVQLCYLRFPGVILGVDELPFPPLLKLVA
DQLKVGVESWNEYGQREQTRREHLSELAMQTDKGIVLASALIGHLRRQSVILPALNAVERASAEAITRANRRIYDALAEP
LADAHRRRLDDLLKRRDNGKTTWLAWLRQSPAKPNSRHMLEHIERLKAWQALDLPTGIERLVHQNRLLKIAREGGQMTPA
DLAKFEPQRRYATLVALATEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASGKAINAKVRLYGRIGQALIDAKQSG
RDAFAAIEAVMSWDSFAESVTEAQKLAQPDDFDFLHRIGESYATLRRYAPEFLAVLKLRAAPAAKNVLDAIEVLRGMNTD
NARKLPADAPTGFIKPRWQKLVMTDAGIDRRYYELCALSELKNSLRSGDIWVQGSRQFKDFEDYLVPPEKFTSLKQSSEL
PLAVATDCEQYLHERLTLLEAQLATVNRMAAANDLPDAIITESGLKITPLDAAVPDTAQALIDQTAMVLPHVKITELLLE
VDEWTGFTRHFTHLKSGDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAWLQAWHTRDETYSTALAELVNAQFR
HPFAGHWGDGTTSSSDGQNFQTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFHTKVVNVGLRDSTYVLDGLLYHESD
LRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYDALKPMIGGTLNIKHVRAHWDEILRLATSIK
QGTVTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQSVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRS
FEQQRYRASGLNLVTAAIVLWNTVYLERAAHALRGNGHAVDDSLLQYLSPLGWEHINLTGDYLWRSSAKIGAGKFRPLRP
LQPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EC042_4089 YP_006098372.1 transposase Not tested Tn2411 Protein 0.0 98
tnpA AAL08440.1 transposase TnpA Not tested SRL Protein 0.0 96
tnpA ACF06153.1 transposase Not tested Tn5036-like Protein 0.0 86
tnpA ACY75538.1 TnpA Not tested Tn6060 Protein 0.0 72
EXA24 ABD94633.1 truncated Tn1721 tranposase Not tested ExoU island A Protein 0.0 72

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_4318 YP_863833.1 transposase Tn3 family protein VFG1031 Protein 0.0 96