Gene Information

Name : Shewana3_4315 (Shewana3_4315)
Accession : YP_863830.1
Strain :
Genome accession: NC_008573
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 203557 - 203949 bp
Length : 393 bp
Strand : -
Note : TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: regulatory protein, MerR; KEGG: neu:NE0843 bacterial regulatory proteins, MerR family

DNA sequence :
ATGAACATGACAAGAACTATCAGTAAAGTTGCCAAAGAACTGGCTATCAATATAGAAACCGTTCGCTTCTATGAGCGTCG
TGGATTAATAGAGCAACCGCCAAAACCCGAGTTGGGCTACCGCCATTATCCCGATGAAACGGTTAATCGCATCCGGTTCA
TTAAGCGGGCGCAAGAATTGGGGTTTACCCTGGAAGAGATCGCCAACCTGCTAAGCTTGAATGACCGCCCATGTGCTCAG
GTGCAGGAGCTGGCCGAGTATAAACTCAGCGCCGTCATGGAAAAAATTGCCGATCTGAAGCGGCTCGAAAGCGCACTCAA
GGCATTATTGACGCAATGTCAGAGTAATAACGATGACTCACATTGTCCCATTATCGACTCCCTGCAACCTTAA

Protein sequence :
MNMTRTISKVAKELAINIETVRFYERRGLIEQPPKPELGYRHYPDETVNRIRFIKRAQELGFTLEEIANLLSLNDRPCAQ
VQELAEYKLSAVMEKIADLKRLESALKALLTQCQSNNDDSHCPIIDSLQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 1e-27 48
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 9e-28 48
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 3e-26 47
merR AFG30124.1 MerR Not tested PAGI-2 Protein 4e-27 47
merR AGK07025.1 MerR Not tested SGI1 Protein 4e-27 47
merR AGK07083.1 MerR Not tested SGI1 Protein 4e-27 47
merR ACK44535.1 MerR Not tested SGI1 Protein 4e-27 47
merR AET25401.1 MerR Not tested PAGI-2(C) Protein 4e-27 47
merR YP_006098391.1 mercuric resistance operon transcriptional regulator Not tested Tn2411 Protein 6e-27 47
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 4e-27 43
unnamed BAB47646.1 orf2 Not tested Type-III SCCmec Protein 7e-21 41
SE0081 NP_763636.1 hypothetical protein Not tested SCCpbp4 Protein 1e-20 41
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 2e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shewana3_4315 YP_863830.1 MerR family transcriptional regulator BAC0688 Protein 2e-28 49
Shewana3_4315 YP_863830.1 MerR family transcriptional regulator BAC0682 Protein 6e-24 48
Shewana3_4315 YP_863830.1 MerR family transcriptional regulator BAC0684 Protein 6e-28 48
Shewana3_4315 YP_863830.1 MerR family transcriptional regulator BAC0689 Protein 9e-28 48
Shewana3_4315 YP_863830.1 MerR family transcriptional regulator BAC0683 Protein 1e-27 47
Shewana3_4315 YP_863830.1 MerR family transcriptional regulator BAC0686 Protein 8e-28 47
Shewana3_4315 YP_863830.1 MerR family transcriptional regulator BAC0687 Protein 2e-27 47
Shewana3_4315 YP_863830.1 MerR family transcriptional regulator BAC0232 Protein 2e-27 47