Gene Information

Name : GFO_0716 (GFO_0716)
Accession : YP_860760.1
Strain : Gramella forsetii KT0803
Genome accession: NC_008571
Putative virulence/resistance : Virulence
Product : ABC-type transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 801613 - 802302 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGATAAAAATCACCAACCTGGAAAAATATTATAAGACGGAAGAGGTACAAACCATCGCGCTTAACAAACTTTCTTTTGA
AGTAAAAGAAGGCGAATTTGCCGCCATCATGGGGCCTTCGGGCTGCGGAAAATCTACCTTACTAAATATCCTGGGGTTAC
TTGATGATCCTGATGGTGGAAGTTACCTCTTTAACGGAACCGAGGTTGCAGGTTATAATGAACGCCAGAGAGCAAAATTG
AGAAAACATAATATCGGTTTCGTTTTTCAGAGTTTTAACCTCATCGATGAACTTAGTGTTTTTGAAAATGTAGAGCTACC
ATTAATCTATACCGGGGTAAAACCAGCAGAAAGAAAAGAACGAGTTCATGAAGTATTAGAAAAAATGCAGATCATGCATA
GAAGAAAACACTTTCCGCAGCAATTATCGGGAGGGCAACAGCAGCGTGTCGCAGTCGCACGGGCAGTTGTTAATAATCCT
AAACTCATATTAGCCGATGAGCCAACCGGAAATCTGGATAGCAGTAACGGAAATGAAGTTATGGATCTTTTAACCGAACT
CAACGAAGCGGGAACCACCATCATCATGGTTACCCACAGTGAACACGACGCAAAATTCAGCCATCGAATCATCAGGATGC
TGGACGGACAGAAAGTGACAGAGAATCTGCTTGCCGAATTTAAAAGTTAA

Protein sequence : 
MIKITNLEKYYKTEEVQTIALNKLSFEVKEGEFAAIMGPSGCGKSTLLNILGLLDDPDGGSYLFNGTEVAGYNERQRAKL
RKHNIGFVFQSFNLIDELSVFENVELPLIYTGVKPAERKERVHEVLEKMQIMHRRKHFPQQLSGGQQQRVAVARAVVNNP
KLILADEPTGNLDSSNGNEVMDLLTELNEAGTTIIMVTHSEHDAKFSHRIIRMLDGQKVTENLLAEFKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 2e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GFO_0716 YP_860760.1 ABC-type transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-47 52
GFO_0716 YP_860760.1 ABC-type transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-37 47
GFO_0716 YP_860760.1 ABC-type transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-31 45
GFO_0716 YP_860760.1 ABC-type transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-31 42
GFO_0716 YP_860760.1 ABC-type transporter ATP-binding protein NC_012469.1.7686946. Protein 6e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GFO_0716 YP_860760.1 ABC-type transporter ATP-binding protein VFG0869 Protein 2e-17 43
GFO_0716 YP_860760.1 ABC-type transporter ATP-binding protein VFG2059 Protein 3e-13 42