Gene Information

Name : araD (GFO_0698)
Accession : YP_860742.1
Strain : Gramella forsetii KT0803
Genome accession: NC_008571
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 774679 - 775383 bp
Length : 705 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGAGTTCGCAGTATAAAGATTTGAAAAAGGAATGTTACGACGCCAATATGCAACTTAATGCATTAGGTTTGGTGATCTA
TACCTTCGGAAATGTAAGCGCGGTAGATCGTGAAAAAGAGGTTTTTGCTATCAAACCAAGCGGAGTTCCATACAAAGACT
TAAAACCTGAAGATATTGTAATTCTCGATTTTGATAATAATGTGATTGAAGGTGAGATGAGACCTTCTTCAGATACTAAA
ACCCATGCTTATCTCTATAAGAATTGGAAAAATATTGGTGGGATAGCGCATACGCATGCCACTTATTCTGTAGCCTGGGC
ACAAAGCCAGAAAGACATTCCAATTTTCGGGACTACACATGCAGATCATCTTACCGAGGATATCCCCTGTGCGGCTCCGA
TGAGGGACGATTTAATCGAAGGAAATTACGAGCATAATACTGGAATTCAAATATTGGATTGCTTTGAGAAAAAGGGAATT
TCATACGAAGAAGTACCAATGGTATTGATCGGGAACCACGGTCCCTTTACCTGGGGTAAAGATGCTGCCAAAGCAGTATA
CCATAGCAAAGTGCTGGAAGCGGTGGCCGAAATGGCTTATCTCACCCTTCAGATAAATCCTGAAGCTCCAAGATTAAAAG
ATTCATTAATAAAGAAACATTATGAGCGTAAGCATGGCAAAGATGCCTATTACGGTCAGAATTAA

Protein sequence :
MSSQYKDLKKECYDANMQLNALGLVIYTFGNVSAVDREKEVFAIKPSGVPYKDLKPEDIVILDFDNNVIEGEMRPSSDTK
THAYLYKNWKNIGGIAHTHATYSVAWAQSQKDIPIFGTTHADHLTEDIPCAAPMRDDLIEGNYEHNTGIQILDCFEKKGI
SYEEVPMVLIGNHGPFTWGKDAAKAVYHSKVLEAVAEMAYLTLQINPEAPRLKDSLIKKHYERKHGKDAYYGQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 6e-51 50