Gene Information

Name : vanX (GFO_0641)
Accession : YP_860686.1
Strain : Gramella forsetii KT0803
Genome accession: NC_008571
Putative virulence/resistance : Resistance
Product : D-alanyl-D-alanine dipeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2173
EC number : 3.4.13.-
Position : 709890 - 710570 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence :
ATGCATAATCTTAAATGGTCATTTTCTATAAGCTTTCTTTTTTTATTATTTGGTCCTTTAAAGGCCCAGGAAATACCCGA
AGGTTTTGTTTATATAGATGAGGTGATCCCAGACATCATATATGAGATTAGATATGCGGGGAGCCATAATTTTGTGGGAA
AACCAATTGACGGTTATGAAGCTAAGCAAGCCATTATTAGTAAACCGGCTGCAAAGGCTCTGGCAAAAGTTCAAAAAGAG
CTTATTCAAAAAGACTTTATGTTGAAAGTTTTTGATGCTTATAGACCGCAACGTGCCGTGAACCATTTTATGGAGTGGGC
GAGGGATAAGGATGATACCTTAATGAAACAGGATTTTTATCCAGATATTGCCAAAAAGAATCTTTTTCAGTTGGGCTATA
TAGCGACTAAATCTGGTCATTCCCGGGGAAGTACGATAGATTTAACGATGATTGGGGTGAGTGATTGTGAAAATGTGGAT
ATGGGTGGAACCTATGATTTCTTCGGAGAGATTTCTCATCATAATGCTTCGCAGATTTCAGAACAACAGAAGAAGAATCG
AGAAATTTTACGGCTTACTATGCGAAAATATGGCTTCAGGTCCTATTCTGAAGAATGGTGGCATTATACGTATGATATGG
AACCTTATCCAGCTACTTATTTTGATTTTCTGGTAAAGTAG

Protein sequence :
MHNLKWSFSISFLFLLFGPLKAQEIPEGFVYIDEVIPDIIYEIRYAGSHNFVGKPIDGYEAKQAIISKPAAKALAKVQKE
LIQKDFMLKVFDAYRPQRAVNHFMEWARDKDDTLMKQDFYPDIAKKNLFQLGYIATKSGHSRGSTIDLTMIGVSDCENVD
MGGTYDFFGEISHHNASQISEQQKKNREILRLTMRKYGFRSYSEEWWHYTYDMEPYPATYFDFLVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 7e-41 44
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 5e-41 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase AF130997.1.orf5.gene Protein 6e-42 46
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase FJ349556.1.orf5.gene Protein 4e-40 45
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase AE016830.1.gene2249. Protein 2e-41 44
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase AF310956.2.orf6.gene Protein 3e-41 44
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase U35369.1.gene7.p01 Protein 1e-41 44
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase NC_005054.2598281.p0 Protein 8e-42 44
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase M97297.gene.p01 Protein 8e-42 44
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase NC_014475.1.orf4.gen Protein 8e-42 44
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase U82965.2.orf32.gene. Protein 2e-44 42
vanX YP_860686.1 D-alanyl-D-alanine dipeptidase AF155139.2.orf6.gene Protein 2e-38 42