Gene Information

Name : GFO_2041 (GFO_2041)
Accession : YP_862073.1
Strain : Gramella forsetii KT0803
Genome accession: NC_008571
Putative virulence/resistance : Virulence
Product : VipB-like polysaccharide biosynthesis protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : 5.1.3.-
Position : 2155478 - 2156476 bp
Length : 999 bp
Strand : -
Note : -

DNA sequence : 
TTGATTACTGAATCTCAGAAAGAAAAAATTTCAGCTTCAAAAATTTTAGTTACTGGCGGAGCCGGCTTTATTGGGTCTAA
CCTTTGTGAAACCTTAATTGGTTTGGGAGCGAAAGTTCGATGTCTCGATAATTTTGCCACTGGCCATAGAAAAAACCTCG
ATCCTATTATCGAAAATTCATCTTTTGAATTGATAGAAGGAGATATAAGAGATATAGATACCTGTAAAATGGCATGTGAA
GGGATTGACTACGTCTTGCATGAGGCTGCTTTGGGATCTGTTCCTAGATCTCTGAAAGATCCTAAAACAAGTAATGACGT
AAATGTATCAGGTTTTTTAAATATGCTTATTGCTGTTAAGGAATCGGAAGTAAAAAGGTTTGTGTATGCTGCCAGTTCTT
CTACTTATGGCGATTCAGAAAAATTACCGAAAATTGAAGATGAAATAGGAAAACCATTATCGCCTTACGCCATAACTAAA
TATGTGAATGAGCTTTATGCAGATATATTTCATAAATCATATGGAGTTGATTCCATAGGATTACGGTATTTTAATGTGTT
TGGAAGAAAGCAGGACCCTAATGGAGCTTACGCCGCGGTAATTCCTAAATTCGTAATGCAATTTATGAAACATGAGAGTC
CGGTAATTAATGGCGATGGAACTTATTCCCGCGATTTTACCTATATAGACAATGTGATCCAAATGAACCTTCTTGCGATA
GTTACGGGTAATCCAGAAGCTGTCAACGAGGTTTATAATACGGCAGTAGGGGATAGGACAGATTTAGTTGAGCTTACACA
AATTCTTAAAAAGCATCTTTCAGAGTTTGATCCTGAAATAAAAAATATAGAAGTAAAACATGGTCCTAATCGGGCGGGGG
ATATACCACATTCACTTGCTTCCGTAGATAAAGCTAAAAATTTACTTGATTATAAGCCAACTCACGCCATTGATGAAGGA
TTAAATGAGGCTGTTAAATGGTATTGGGAAAATTTGTAG

Protein sequence : 
MITESQKEKISASKILVTGGAGFIGSNLCETLIGLGAKVRCLDNFATGHRKNLDPIIENSSFELIEGDIRDIDTCKMACE
GIDYVLHEAALGSVPRSLKDPKTSNDVNVSGFLNMLIAVKESEVKRFVYAASSSTYGDSEKLPKIEDEIGKPLSPYAITK
YVNELYADIFHKSYGVDSIGLRYFNVFGRKQDPNGAYAAVIPKFVMQFMKHESPVINGDGTYSRDFTYIDNVIQMNLLAI
VTGNPEAVNEVYNTAVGDRTDLVELTQILKKHLSEFDPEIKNIEVKHGPNRAGDIPHSLASVDKAKNLLDYKPTHAIDEG
LNEAVKWYWENL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 6e-81 54
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 6e-81 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GFO_2041 YP_862073.1 VipB-like polysaccharide biosynthesis protein VFG0430 Protein 3e-81 54