Gene Information

Name : GFO_2039 (GFO_2039)
Accession : YP_862071.1
Strain : Gramella forsetii KT0803
Genome accession: NC_008571
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : 1.1.1.-
Position : 2153442 - 2154728 bp
Length : 1287 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAGAAAAAAAAATAGCAGTTATAGGGTTAGGATATGTAGGATTACCTCTTGCAAGATTGTTTGCCACTAAATATAC
CGTTGTAGGATTCGATATCAATAAAGCTAGGGTAGAAGAATTGATGAACGGTCATGATTCAACGATGGAAGTAGAGGATG
ATTTACTGCAGTCTGCGCTAATAAAAAAGGCTGATTTAAAAAATACTAAGGGTTTATTTTGTTCTTACGATCTTATCGAT
ATTTCTGACTGTAATTTTTATATTATAACAGTTCCCACACCGGTAGATAAAAATAATCGTCCAGACCTTACACCTCTCTA
TAAAAGTAGTGAAACTGTAGCAAAGGTTTTGAAAAAAGGAGACGTAGTGATTTACGAATCCACAGTCTATCCCGGAGTAA
CAGAGGATGAATGTGTTCCTGTTCTTGAAAAACATTCTGGACTAGAATTTAATCAGGATTTTTTTGTAGGATATTCACCT
GAAAGAATAAATCCGGGAGACAAAGAGCATACGGTTGAAAAAATTTTAAAAGTTACAGCAGGATCTACCCCGGAAATTGG
AAAAGAAGTTAACGATTTATATGCTGAAGTGATAACTGCTGGAACTCATTTAGCTCCGACGATCAAAGTAGCAGAAGCCG
CCAAAGTAATTGAAAATTCTCAGCGTGATATTAATATTGCATTTGTTAATGAATTAGCAAAGATTTTCAATATGATGGGG
ATTGATACTCAGGATGTACTGGAAGCTGCTGGTACTAAGTGGAATTTTCTGCCATTTCGACCAGGATTAGTCGGTGGACA
TTGTATCGGTGTAGATCCTTATTATCTTGCTCAAAAAGCACAGGAAATTGGATATCACCCTGAAATTATCCTTGCAGGTA
GAAGGATGAATGATTCCATGGGGCAATATGTCGCTTCTGAACTAGTGAAGTTAATGCTGCAAAATGATATTAAGGTCAAA
AACTCAAAAATTTTAGTACTAGGTATCACCTTCAAAGAAAACTGTCCTGATGTTCGCAATACTAAGGTCGTTGATGTAAT
TAAAAGTCTAAAAGAATATGGCGTAGATATTACTATATATGATCCTCTTGCTAATCCTGCTGAAGTAATGCACGAGTATG
GGTTAGAAACAACAAAAAATCAACCAGATTCAAAATTTGATGCGATATTGTTAACAGTGGCGCATAAGGAATTCATTAGC
CTGAATTTTGATGATTTAAAACAGCTAGTTTCTGTAGTTTATGATGTTAAAGGTGTATTGGGAGATAGATGTGATAGAAA
GTTATAG

Protein sequence : 
MKEKKIAVIGLGYVGLPLARLFATKYTVVGFDINKARVEELMNGHDSTMEVEDDLLQSALIKKADLKNTKGLFCSYDLID
ISDCNFYIITVPTPVDKNNRPDLTPLYKSSETVAKVLKKGDVVIYESTVYPGVTEDECVPVLEKHSGLEFNQDFFVGYSP
ERINPGDKEHTVEKILKVTAGSTPEIGKEVNDLYAEVITAGTHLAPTIKVAEAAKVIENSQRDINIAFVNELAKIFNMMG
IDTQDVLEAAGTKWNFLPFRPGLVGGHCIGVDPYYLAQKAQEIGYHPEIILAGRRMNDSMGQYVASELVKLMLQNDIKVK
NSKILVLGITFKENCPDVRNTKVVDVIKSLKEYGVDITIYDPLANPAEVMHEYGLETTKNQPDSKFDAILLTVAHKEFIS
LNFDDLKQLVSVVYDVKGVLGDRCDRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-114 55
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 1e-114 55
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-108 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GFO_2039 YP_862071.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 5e-115 55