Gene Information

Name : GFO_1988 (GFO_1988)
Accession : YP_862020.1
Strain : Gramella forsetii KT0803
Genome accession: NC_008571
Putative virulence/resistance : Virulence
Product : exopolysaccharide production related sugar transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : 2.-.-.-
Position : 2104204 - 2104809 bp
Length : 606 bp
Strand : -
Note : -

DNA sequence : 
ATGTATAATAAAATTATTAAACCACTATTAGATTTTCTGGTTGCATTGTTAGGTTTGGTTATACTTAGTCCTTTATTAAT
CCTAATAACACTCCTACTTGCGATAGCTAACAGGGGCAAACCTTTCTTTTTTCAGAATAGGCCTGGGAAGTTAGGCGAAA
ATTTCAGAATTGTAAAGTTTAAAACAATGACCGATGCTAGGGATAAAGAAGGAAACTTATTACCGGATGCTTCAAGGTTG
ACTGCGATTGGAAAATTTGTGCGAAAAACGTCTATTGATGAAATACCGCAATTATTTAATGTTTTAAATGGAGATATGAG
TATAATAGGTCCCAGACCCTTATTGCCAGAATATTTGGAAATTTATACAGAATCGCAAAGCAAGAGACATAATGTAAGGC
CAGGAATTACGGGTTGGGCTCAGGTAAACGGGCGGAATGCAATTAGCTGGACTCAAAAGTTCAGTTACGATATCTGGTAT
GTTGAAAATATTTGTTTCAGTTTAGATTTAAAGATATTATTTCGAACAATTAGAAAAGTGCTAATTTCAGAAGGGATTAA
TACTGAGAATATGGCAACAACAGAACCTTTTAACGGAAAAAATTAA

Protein sequence : 
MYNKIIKPLLDFLVALLGLVILSPLLILITLLLAIANRGKPFFFQNRPGKLGENFRIVKFKTMTDARDKEGNLLPDASRL
TAIGKFVRKTSIDEIPQLFNVLNGDMSIIGPRPLLPEYLEIYTESQSKRHNVRPGITGWAQVNGRNAISWTQKFSYDIWY
VENICFSLDLKILFRTIRKVLISEGINTENMATTEPFNGKN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-25 46
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 3e-25 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GFO_1988 YP_862020.1 exopolysaccharide production related sugar transferase VFG1309 Protein 3e-26 44
GFO_1988 YP_862020.1 exopolysaccharide production related sugar transferase VFG1369 Protein 5e-18 41