Gene Information

Name : GFO_0196 (GFO_0196)
Accession : YP_860259.1
Strain : Gramella forsetii KT0803
Genome accession: NC_008571
Putative virulence/resistance : Resistance
Product : ABC-type transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 235692 - 236393 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGATCGAAATTTCGAATCTCCACAAATCCTATAAAATGGGTGCTAATTCTCTCCATGTTCTCAAGGGAATTAATCTCGA
CATCAAAGAAGGTGAGTTGGTATCTATAATGGGTTCTTCCGGTTCTGGGAAGTCTACACTCCTGAATATTCTGGGAATGT
TAGATGAGGCAGATGAAGGATCTTACATGCTTGATGGAGTTCCTATTAAGAACTTAAATGAAAAAAAAGCCGCACAGTAC
CGAAATAAATTCCTTGGTTTTATATTTCAATCATTTAATCTTATTTCCTATAAAACTGCATTAGATAATGTTGCTCTTCC
CTTGTATTACCAGGGGTTTCCTCGTAATGAAAGAATGGACAGGGCCAACAGCTATCTTGAAAAAGTAGGACTGGCAGACT
GGGCAGGTCATTTGCCAAATGAACTTTCAGGAGGACAAAAACAAAGAGTAGCTATAGCCAGGGCTTTGGCGAGCGATCCT
AAAGTATTGCTGGCAGATGAGCCTACCGGAGCACTTGATACCAAGACCTCTTATGAGGTAATGGATTTAATTCAGAAGAT
CAATGATGACGGCCGTACTATTCTGGTTGTTACCCATGAACATGACATCGCCCAAATGACAAAGAGAATTGTCAATTTGA
AAGACGGAGTTATTATAGAAGATACCGTGGTTTCACAGATAAGAGCGATGGAAAATGTTTGA

Protein sequence : 
MIEISNLHKSYKMGANSLHVLKGINLDIKEGELVSIMGSSGSGKSTLLNILGMLDEADEGSYMLDGVPIKNLNEKKAAQY
RNKFLGFIFQSFNLISYKTALDNVALPLYYQGFPRNERMDRANSYLEKVGLADWAGHLPNELSGGQKQRVAIARALASDP
KVLLADEPTGALDTKTSYEVMDLIQKINDDGRTILVVTHEHDIAQMTKRIVNLKDGVIIEDTVVSQIRAMENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-34 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-35 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-35 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GFO_0196 YP_860259.1 ABC-type transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-55 53
GFO_0196 YP_860259.1 ABC-type transporter ATP-binding protein NC_008702.1.4606598. Protein 7e-43 46
GFO_0196 YP_860259.1 ABC-type transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-35 42
GFO_0196 YP_860259.1 ABC-type transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-35 41