Gene Information

Name : GFO_1949 (GFO_1949)
Accession : YP_861981.1
Strain : Gramella forsetii KT0803
Genome accession: NC_008571
Putative virulence/resistance : Resistance
Product : ABC-type transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2050175 - 2050855 bp
Length : 681 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAAGATATTAAGTATTGAAAATCTGAAGAAAAGCTATAGCAGTGGCTCAAAAGAGCTTACTGTTTTGGAAAATAT
CAGTTTTGATATAGAAGAAAAAGAAACCTTTGCCATTGTAGGTCCTTCCGGAAGTGGGAAAACTACCCTTTTAGGACTTT
GTGCCGGCCTGGATCAGCCAGATTCAGGGAAAATTGAACTTTGCGGAACTATGATCAACGATTTAAATGAAGATCAAAGA
GCCGTTTTAAGAAATCAAAAAGTAGGCTTCGTATTTCAGGATTTTCAATTAATACCTACTCTTACCGCTTTGGAGAATGT
TGCTGTCCCTTTGGAATTGCGCGGGGATAAAAAGGCCACCCAAATAGGAAAAGAATTACTGGAAAAAGTAGGTTTAGGAA
AACGTTTTGATCATTACCCTTCGCAGCTATCTGGAGGAGAACAGCAACGTGTGGCCCTTGCCAGGGCATTCAGTAATAAA
CCGGCGATACTTTTTGCAGATGAACCTACGGGAAATCTTGATGAAGAAACAGGGAAAAAGGTAATAGAACTGCTTATTGA
ACTAAATGAAGAATCTGGCACTACTCTGGTTATAGTAACTCACGATATGGAGCTGGCGAAAAAAACTCAAAGAATATTAC
GTCTTAAAGGTGGAAGAGTAATGGAAACTTTAAACGTATAG

Protein sequence :
MAKILSIENLKKSYSSGSKELTVLENISFDIEEKETFAIVGPSGSGKTTLLGLCAGLDQPDSGKIELCGTMINDLNEDQR
AVLRNQKVGFVFQDFQLIPTLTALENVAVPLELRGDKKATQIGKELLEKVGLGKRFDHYPSQLSGGEQQRVALARAFSNK
PAILFADEPTGNLDEETGKKVIELLIELNEESGTTLVIVTHDMELAKKTQRILRLKGGRVMETLNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 3e-23 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 5e-31 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-36 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-36 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 42
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GFO_1949 YP_861981.1 ABC-type transporter ATP-binding protein NC_012469.1.7686878. Protein 6e-40 47
GFO_1949 YP_861981.1 ABC-type transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-38 45
GFO_1949 YP_861981.1 ABC-type transporter ATP-binding protein CP001581.1.gene598.p Protein 7e-38 41
GFO_1949 YP_861981.1 ABC-type transporter ATP-binding protein NC_012469.1.7685735. Protein 4e-37 41