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Name : gspF (AHA_0571) Accession : YP_855104.1 Strain : Aeromonas hydrophila ATCC 7966 Genome accession: NC_008570 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 607271 - 608491 bp Length : 1221 bp Strand : + Note : identified by match to protein family HMM PF00482; match to protein family HMM TIGR02120 DNA sequence : ATGGCAGCATTCGAATACAAGGCCCTCGACGGCAAGGGACGCAACAAGAGCGGCGTGCTGGAGGGGGATTCCGCCCGCCA GGTACGCCAGCTGTTGCGCGAGCAGGGGCTGACCCCGCTCGAGGTGAACGAGACCACCGAGAAGGCCAAGCGCGAGGCGA ACCGCTTCGTGTTGTTCCGCCGTGGTGCCAGCACCGCCGAGCTTGCGATGATTACCCGCCAGCTGGCTACCCTGGTGGGG GCCGGGCTCACCATCGAAGAGGCGCTCAAGGCCGTCGCCGAGCAGTGCGAGAAGGCCCACCTGCGCAGCATGGTGGCCAC GGTGCGCAGCAAGGTGGTGGAGGGCTATTCGCTGGCCGACTCGCTGGCGGCCTTCCCCCATGTGTTCGATCAGCTGTTCC GCTCCATGGTGGCGGCCGGCGAGAAGTCCGGTCACCTGGAGAAGGTGCTCAACCGCCTCGCCGACTACACCGAGCAGCGT CAGCACATGCGCACCAAGCTGCTGCAGGCGATGATCTACCCCATCGTATTGACCTGCGTCGCCATCGGCGTTATCTCCAT CCTGCTCACCGCCGTGGTGCCCAAGGTGGTGGCCCAGTTTGAACATATGGGTCAGCAACTGCCGGCCACCACCCGTTTCC TCATCGGTACCAGCGAGCTGATGCAGCACTACGGCCTCTGGTTCCTGTTGCTGCTGCTGGTGGGTGGCTTTGTCTGGCGC TGGTGGCTGACCGATGACAAGCGTCGACGTCACTGGCACCAGCTGATCCTGCGCCTGCCGGTGATCGGTCGGGTCAGCCG TGGTCTCAACACCGCCCGTTTTGCTCGCACCCTGAGCATCCTCAACGCCAGCGCCGTGCCGCTGCTGGAGGGGATGAAGA TCTCCGGCGAAGTGCTCTCCAATGACTTTGCCCGCATGCGCATCGGTGAGGCCACCGAGCGGGTGCGGGAGGGGACCAGC CTGCGCAAGTCGCTGGATGAAACCAAAATTTTTCCGCCCATGATGCTGCACATGATCGCCTCCGGCGAGCAGAGCGGCGA GCTCGACAACATGCTGGAGCGGGCGGCGGACAACCAGGATCGGGAGTTCGAAACCCAGGTGAACATCGCCCTCGGGGTGT TCGAACCCATGCTGGTGGTCTCCATGGCCGGGGTGGTGCTGTTTATCGTGATGTCGATCCTGCAGCCGATCCTTGAGCTC AACAATATGGTGAATCTGTAG Protein sequence : MAAFEYKALDGKGRNKSGVLEGDSARQVRQLLREQGLTPLEVNETTEKAKREANRFVLFRRGASTAELAMITRQLATLVG AGLTIEEALKAVAEQCEKAHLRSMVATVRSKVVEGYSLADSLAAFPHVFDQLFRSMVAAGEKSGHLEKVLNRLADYTEQR QHMRTKLLQAMIYPIVLTCVAIGVISILLTAVVPKVVAQFEHMGQQLPATTRFLIGTSELMQHYGLWFLLLLLVGGFVWR WWLTDDKRRRHWHQLILRLPVIGRVSRGLNTARFARTLSILNASAVPLLEGMKISGEVLSNDFARMRIGEATERVREGTS LRKSLDETKIFPPMMLHMIASGEQSGELDNMLERAADNQDREFETQVNIALGVFEPMLVVSMAGVVLFIVMSILQPILEL NNMVNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-103 | 56 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-102 | 56 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspF | YP_855104.1 | general secretion pathway protein F | VFG2049 | Protein | 4e-97 | 55 |
| gspF | YP_855104.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-93 | 51 |
| gspF | YP_855104.1 | general secretion pathway protein F | VFG1870 | Protein | 2e-83 | 43 |
