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Name : AHA_0521 (AHA_0521) Accession : YP_855054.1 Strain : Aeromonas hydrophila ATCC 7966 Genome accession: NC_008570 Putative virulence/resistance : Virulence Product : outer membrane usher protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 553888 - 556422 bp Length : 2535 bp Strand : + Note : identified by match to protein family HMM PF00577 DNA sequence : ATGAGCGTTTCAACATCAGACTCTGTGAGAAAAAAACATTATTCAAAAATGGTTTTCATGCTATGCGTGCCCGGCCTGAT GGCGGTGGCAAATCACGCATGGGCAGAAACGGAGTTTAATATTGATGCGCTCGATCTGGACGAACGGACCAAGATCGACC TCTCCCAGTTTGCCGACGAAGGTTACATCCTGCCCGGCGACTACTACCTCGAGATCGAGGTCAACAAGAACAAGCTGCCC CTGCAGAAGATCCCTTTCTACGAGACCGATACCGGCAAGGGAAAGGGTGGGGTGGCCTGCCTGCCGCAAGAGGTGATCCC CAAGCTGGCGCTGACCGACGAGGCCATCGCCAAGATCGATACCTGGCACGATGGCCAGTGTGCTAACCTGCTGGCGCTGG ACGGTGTGGTGATCGCGAACGACATAGGTAACGGCTTGCTGCGCATCGCCGTGCCCCAGGCGTGGATGAAGTACAGCGAT CCCAACTGGATTCCGCCCGAACAGTGGGATGAAGGGATCCCGGGGATGATGCTGGATTACAACATCAACGCCCAGGTCAA TGAAGGGGATGGTTACTCCAACCGCAACATCAGCAGCTACGGTACGCTGGGGTTCAACTATGGCGCCTGGCGCCTGCGGG GCGACTACCAGGCCAATGCCTACTGGGGTGACAACGAGCGGACCACTTCCGAGCTGAACCGCATCTATGCCTATCGTCCG CTGCCAGACATGGCCGCCAAGCTGACGGTGGGTGAGCAGCAGCTCAACTCCCAACTGATCGACGGCTTCCGCTATACCGG CGTCAACCTGGCCAATGATGAGCGCATGCTGCCGCCGAGCCTGCAGGGCTATGCGCCGGAAGTAAGCGGCATCGCCAAGA CCAACGCCAAGGTCACCATCTCCCAGTCCGGCCGCATCCTCTATGAGACCAACGTGCCGGCCGGTCCGTTTCGCATCCAG GGGCTGGACAGCTCGGTACGCGGCCGCCTCGACGTGCGGGTAGAGGAGCAGGATGGCAGCGTCAACTCGTTCCAGGTCGA TACCGCGACCGTCCCCTATCTGACCCGTCCCGGCTACGTCAGATACAACCTGGCGGTCGGCGCACCTTCCGAACAGACAG ATTCGGTGCACGATGTGCATGGCCCGGCCTTTGTGACCGGAGATTTCTCCTGGGGGGTGGCCAACTCCTGGTCGCTGTAC GGTGGCAGCCTGGTTGCGGGTGAATACAACTCCATGGGGCTGGGTATCGGTCGCGATCTCTATGCCTTCGGCGCCATCTC GGCCGACCTGACCCAGTCCATTGCCAAGCTGCCGGGCCTGTCGACCAAGATTGGCCAGTCGGTGCGGGTGAACTACGCCA AGCAGTTTGATGAATACAACAGCTCGATCACCTTCGCCGGTTATCGTTTCTCCCAGCACAACTTTATGACCATGTCGCAG TTCCTGAGCAACAAGGAGCGGCTGGAGAAGAACGAAACGACCTCGAGCGATGACTACAACACCTGGGGTGACAAGGAGCT CTACACCATCACCGCCAACAAGACCTTCTGGGCGGAGGATGCGGCCAAGGCGCTGACAGTCTATCTGGACTACACCCACA GAACTTATTGGGAGCACGATGCCGAGGATCGCTACGGCCTCACCATCAACAAGAACGTGAACATCGGCAGCTTCAAGGAT GTCTCCGTCTATGTGTCGGCCTACAAGACCAAGACCGAGAACTACGAGGATGACAAGAGCGTCATGCTGACCCTGAGCAT GCCGATCGGGGACAGAAAGAGCGCGGGATACAGCGTGCAGTCCTCCAATGGCAAGGTCACCCATCTGGCCACCTATCAGG ATTACAGCCGGCCGGACGATACCTATCAGCTGGGGGCGGGCGTGCAGAGCAACGGCCATGCCGTGGCGCGGGGCTACTAC AACCACAACAGCGACATCGGGGCGGTCAGCCTCAATGCCTACAGCGTGCAGAGCGAATACACCTCGGTCGGCGCCAGCCT GCGTGGCGGTCTGACGGCGACCCAGCACGGTGCAGCCCTGCACCAGGCGACCCGTCGTGGCGGTACCCGGATGATGGTGG ACACCGACAAGACCTCCGGCGTCTCCTTCAACAACGGTCGCGCCGTAACCAACCGCTTTGGCGTCGCGGTGATCAGCGAC ATGACCGACTATCGCAAGAGCGACACCCGGGTGGACGTGGATCAGCTGAGCGATGACATCGATGCGATGAACGCCATCAA GCAGGGGACCCTGACCGAGGGCGCAATTGGGTATAATGCCTTCGAAATGGCCGAAGGGTTCAAGCTGCTGGCCAACGTCA AACTGCCCGATGGTTCAGTGCCGCCGTTTGGTGCCACCGTCGTCAAGGATTCCGGCCGGGTGCTCTCGGTGGTGGATGAA GATGGCCTGGTCTATCTGACCGGGGTGAAACCGAATGAAGCGTTTGAACTCTCCTGGGGCGGCGCCCGCCAGTGCAAGAT AGTGGCGCCGCAACAAGTAACCGATCTGTCGATGAAGACTCTCACTTGCAAGTAA Protein sequence : MSVSTSDSVRKKHYSKMVFMLCVPGLMAVANHAWAETEFNIDALDLDERTKIDLSQFADEGYILPGDYYLEIEVNKNKLP LQKIPFYETDTGKGKGGVACLPQEVIPKLALTDEAIAKIDTWHDGQCANLLALDGVVIANDIGNGLLRIAVPQAWMKYSD PNWIPPEQWDEGIPGMMLDYNINAQVNEGDGYSNRNISSYGTLGFNYGAWRLRGDYQANAYWGDNERTTSELNRIYAYRP LPDMAAKLTVGEQQLNSQLIDGFRYTGVNLANDERMLPPSLQGYAPEVSGIAKTNAKVTISQSGRILYETNVPAGPFRIQ GLDSSVRGRLDVRVEEQDGSVNSFQVDTATVPYLTRPGYVRYNLAVGAPSEQTDSVHDVHGPAFVTGDFSWGVANSWSLY GGSLVAGEYNSMGLGIGRDLYAFGAISADLTQSIAKLPGLSTKIGQSVRVNYAKQFDEYNSSITFAGYRFSQHNFMTMSQ FLSNKERLEKNETTSSDDYNTWGDKELYTITANKTFWAEDAAKALTVYLDYTHRTYWEHDAEDRYGLTINKNVNIGSFKD VSVYVSAYKTKTENYEDDKSVMLTLSMPIGDRKSAGYSVQSSNGKVTHLATYQDYSRPDDTYQLGAGVQSNGHAVARGYY NHNSDIGAVSLNAYSVQSEYTSVGASLRGGLTATQHGAALHQATRRGGTRMMVDTDKTSGVSFNNGRAVTNRFGVAVISD MTDYRKSDTRVDVDQLSDDIDAMNAIKQGTLTEGAIGYNAFEMAEGFKLLANVKLPDGSVPPFGATVVKDSGRVLSVVDE DGLVYLTGVKPNEAFELSWGGARQCKIVAPQQVTDLSMKTLTCK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 6e-164 | 45 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 5e-159 | 44 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 6e-159 | 44 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 8e-159 | 44 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 7e-159 | 44 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 2e-157 | 43 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 2e-157 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| AHA_0521 | YP_855054.1 | outer membrane usher protein | VFG1548 | Protein | 3e-159 | 44 |
| AHA_0521 | YP_855054.1 | outer membrane usher protein | VFG0884 | Protein | 3e-159 | 44 |
| AHA_0521 | YP_855054.1 | outer membrane usher protein | VFG0895 | Protein | 3e-159 | 44 |
