Gene Information

Name : rph (AHA_4224)
Accession : YP_858647.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 4676658 - 4677431 bp
Length : 774 bp
Strand : -
Note : identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966

DNA sequence :
TTGGGCTGGGATCACTTATACTCCTGCGCCAATTCAGCCAGCCCAGAGGTCCGTCCCATGTCACGTCCCAGCGATCGCAC
TGCCGCGCAGCTTCGTCCGGTCACCATTACCCGCCACTTCACCAAGCATGCTGAAGGGTCCGTGCTGGTGGAATTCGGCA
ACACCCGCGTGCTCTGCACCGCCAGCGTCGACACCAGCGTGCCGCGCTTCCTGAAAGGGAAGAATCAGGGCTGGGTGACC
GCCGAGTACGGCATGCTGCCGCGCTCCACCCACTCCCGGATGAATCGCGAAGCGGCCTCCGGCAAGCAGAGCGGCCGCAC
TCTGGAGATCTCCCGGCTGATCGCCCGCTCCCTGCGCGCGGCGGTAGACCTGACCGCGCTGGGCGAACACTCCATCACAG
TTGACTGCGACGTGCTGCAGGCCGACGGTGGCACCCGCACCGCCGCCATTACAGGTGCCTGCGTGGCGCTGGTGGATGCG
CTGAACTGGATGGTCGAGAAGGGCATGCTCAAGCAGAGCCCGCTCAAGCAGATGATCGCGGCCGTCTCCGTCGGCATGTA
TCAGGGCGAAGCCATCTGCGATCTGGAGTACATCGAAGACTCCGCCGCCGAGACCGACATGAACGTGGTGATGACCGAAG
ATGGTCGCATCATCGAGGTGCAGGGCACCGCGGAGGCCGAACCCTTCACCCATGAAGAGCTGCTGGAGATGCTGGCGCTC
GCCAAGGGCGGCATCGCCGACATCATTGCGCTGCAGAAGCAGTCACTTGCATGA

Protein sequence :
MGWDHLYSCANSASPEVRPMSRPSDRTAAQLRPVTITRHFTKHAEGSVLVEFGNTRVLCTASVDTSVPRFLKGKNQGWVT
AEYGMLPRSTHSRMNREAASGKQSGRTLEISRLIARSLRAAVDLTALGEHSITVDCDVLQADGGTRTAAITGACVALVDA
LNWMVEKGMLKQSPLKQMIAAVSVGMYQGEAICDLEYIEDSAAETDMNVVMTEDGRIIEVQGTAEAEPFTHEELLEMLAL
AKGGIADIIALQKQSLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 2e-67 59