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Name : clpB (AHA_4071) Accession : YP_858496.1 Strain : Aeromonas hydrophila ATCC 7966 Genome accession: NC_008570 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 4505107 - 4507680 bp Length : 2574 bp Strand : - Note : identified by similarity to SP:P63284; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728 DNA sequence : ATGCGCCTCGATCGCCTGACCAGCAAATTCCAGATTGCTATTTCCGATGCCCAGTCTTTGGCACTGGGTCGTGACCACCA ATTCATCGAACCCGTTCACCTGATGACCGCCCTGGTCAATCAGGATGGCGGCTCCATCCGTCCGCTGCTCACCCTGACCG GGATGGACATCAATTCTCTGCGCTCGCGCCTCGGCGAAGAGCTGGATCGGCTGCCCAAGGTGAGCGGCGTGGAGGGCGAT GTGCAGCTCTCCAACGGCCTCGGCCGGCTGCTCAACGTCTGCGACAAGCTGGCTCAGCAGCGCAAGGATCAGTTCATCTC ATCCGAACTGTTCGTGCTGGCGGCCCTCGACGAGAAGGGGACGCTGGGTGAGCTGCTGCGTGCCCAGGGGCTGACCAAGG AGAAACTCGAAGCGGCCATCGACAAGGTGCGTGGCGGCAAGAAGGTGGAAGATGCCAACGCCGAGGAGAATCGCCAGGCG CTGGAGAAATACACCATCGATCTGACCGAGCGGGCCGAGATCGGCAAGCTCGACCCGGTGATCGGCCGGGATGACGAGAT CCGCCGCACCATCCAGGTGCTGCAACGCCGTACCAAGAACAACCCTGTGCTGATCGGTGCCCCCGGCGTCGGCAAGACCG CCATCGTCGAAGGGCTGGCCCAGCGCATCATCAATGGCGAGGTGCCGGAGGGGCTCAAGAACAAGCGGGTGCTGTCGCTC GACATGGGGGCGCTGGTGGCCGGTGCCAAGTATCGTGGCGAGTTCGAAGAGCGGCTCAAGGCCGTGCTCAACGATCTGGC CAAGGAGGAGGGCAACGTCATCCTCTTCATCGATGAGCTGCACACCATGGTCGGCGCCGGCAAGGGTGAAGGCGCCATGG ATGCGGGCAACATGCTCAAACCGGCGCTGGCCCGTGGCGACCTGCACTGCGTCGGCGCCACCACCCTGGACGAGTACCGC CAGTACATCGAGAAGGATGCAGCCCTCGAGCGCCGCTTCCAGAAGGTGCTGGTGGAGGAGCCGAGCGTGGAGGACACCAT CGCCATCCTGCGCGGCCTGAAGGAGCGTTACGAACTGCACCACCACGTGCAGATCACCGACCCTGCCATCGTGGCGGCGG CCCAGCTGTCGCACCGCTACATCGCGGATCGCCAGCTGCCGGACAAGGCCATCGACCTCATCGACGAGGCGGCGGCCAGT ATCCGGCTGCAGATCGACTCCAAGCCCGAGTCCCTCGATCGGCTCGAGCGGCGCATCATCCAGCTCAAGCTGGAGCAGCA GGCACTGATGAAAGAGGACGATGACGCCAGCCGCAAACGGCTCGAGCTGATCAATCAGGAAATCAGCGAAAAAGATCGGG AATACAACGAGCTGGATGAGGTGTGGAAGGCCGAGAAGGCCGCCCTCGCCGGCACCCAGCACATCAAGGCGGCCCTCGAG CAGGCCCGCCAGGATCTCGACGTGGCGCGCCGCGCAGGCGATCTGGGCCGGATGTCAGAGCTGCAGTACGGCCGCATTCC GGAACTGGAGAAACAGCTGGATCTCGCCACCCAGGCCGAGATGCAGGAGACCAGTCTGCTGCGCAACCGGGTCACCGACG TGGAGATAGCCGACGTCCTGGCCCGCTGGACCGGTATTCCGGTGGCCCGCATGCTGGAAGGGGAACGCGACAAGCTGCTG CGGATGGAAGATCAGCTGCACAGCCGGGTGATCGGCCAGGAAGAGGCGGTCGAGGCGGTTTCCAACGCCATTCGCCGCTC CCGCGCCGGGCTGTCCGACCCGAACCGCCCCATCGGCTCCTTCCTGTTCCTGGGGCCCACCGGGGTGGGCAAGACCGAGC TGTGCAAGGCGCTGGCCGAGTTCCTGTTCGATACCCAGGACGCCATGGTGCGGATCGACATGTCGGAGTTCATGGAGAAA CACAGCGTGGCCCGTCTGGTGGGGGCGCCTCCGGGATACGTGGGTTACGAGGAGGGTGGTTATCTGACCGAGGCGGTGCG CCGTCGCCCCTACTCGGTGATCCTGCTGGATGAAGTGGAGAAGGCACACCCGGACGTGTTCAACATCCTGCTGCAGGTGC TGGACGATGGCCGCCTGACCGATGGTCAGGGTCGTACCGTCGATTTTCGCAACTCGGTGGTGATCATGACCTCCAACCTC GGGTCGGATCTCATTCAGGAGCACCACTCCGAGAAGGATTACGACGAGATGAAGGGCATGCTGATGGAGGTGCTGACCCG CAGCTTCCGGCCGGAGTTCATCAACCGGATCGACGAGACCGTGGTGTTCCACCCGCTCGGCGAGGAGCACATCAAGTCCA TCGCCCGCATCCAGCTCAAGAGCTTGATGGGCCGACTGGAGGCTCAGGGTTACGAGGTGGAGGTGAGCGAGGCGCTGCTC GAGAAACTGGTGCACGCCGGGTTCGATCCCGTCTACGGGGCGCGTCCCCTCAAGCGGGCGATCCAGCACAAGGTGGAGAA CCCGCTGGCGCAGGCGCTGCTCTCCGGCCGCATCGTGCCGGGCAAAAAGCTGGTGCTGGGGGCCGACAGCAACGGCCTCA CCATGACCCAGTAA Protein sequence : MRLDRLTSKFQIAISDAQSLALGRDHQFIEPVHLMTALVNQDGGSIRPLLTLTGMDINSLRSRLGEELDRLPKVSGVEGD VQLSNGLGRLLNVCDKLAQQRKDQFISSELFVLAALDEKGTLGELLRAQGLTKEKLEAAIDKVRGGKKVEDANAEENRQA LEKYTIDLTERAEIGKLDPVIGRDDEIRRTIQVLQRRTKNNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSL DMGALVAGAKYRGEFEERLKAVLNDLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYR QYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHRYIADRQLPDKAIDLIDEAAAS IRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRKRLELINQEISEKDREYNELDEVWKAEKAALAGTQHIKAALE QARQDLDVARRAGDLGRMSELQYGRIPELEKQLDLATQAEMQETSLLRNRVTDVEIADVLARWTGIPVARMLEGERDKLL RMEDQLHSRVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALAEFLFDTQDAMVRIDMSEFMEK HSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNL GSDLIQEHHSEKDYDEMKGMLMEVLTRSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEVEVSEALL EKLVHAGFDPVYGARPLKRAIQHKVENPLAQALLSGRIVPGKKLVLGADSNGLTMTQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 3e-156 | 44 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 7e-107 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_858496.1 | ATP-dependent chaperone protein ClpB | VFG0079 | Protein | 1e-142 | 44 |
