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Name : topB (AHA_4047) Accession : YP_858472.1 Strain : Aeromonas hydrophila ATCC 7966 Genome accession: NC_008570 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 4483649 - 4485619 bp Length : 1971 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGACTCTTCATCGCCGAGAAGCCCAGTCTGGGACGTGCCATTGCCGACGTGCTGCCCAAGCCCCACAAGAAGGGGGA CGGTTTTATCGAAACCGCGCAGGGGGATGTGGTGACCTGGTGCATCGGCCATCTGCTGGAGCAGGCCGAGCCGGATGCCT ATGACGCCGCCTACAAGCAGTGGCGCATGGAGTCGCTACCCATCGTCCCGAGCCAGTGGCAACTGGTGGCCAAGCCGAAG ACCAAGACCCAGCTCACCGTCATCAAGCGCCTGCTCAAGCAGGCCGACTGCGTGGTCAACGCCGGTGACCCGGACCGGGA GGGGCAGCTGCTGGTGGACGAGGTGATCGATTTCCTCGGCTACGGCAAAACCAGGCCGGTGCTGCGCTGTCTCATCAGCG ATCTCAACCCACCGGCGGTGCGCCGTGCCCTCGACAAGCTCAGGGACAACAAGGAGTTCGTGCCGCTGGCGGTGTCGGCG CTGGCCCGCAGCCGGGCCGACTGGCTCTACGGCATCAACATGACCCGCGCCTATACCCTGCTTGGCCGCAAGGGGGGTTG CAGCGAGCTGCTGTCGGTCGGTCGGGTACAGACGCCGCTGCTGGGGCTGGTGGTACGGCGGGATCTCGAGATAGAAGCCT TCGTGCCCAAGCCCTTCTTCGAGGTGCTGGCCCATCTACAGACCGAAGGCAACGAGCGTTTCAGCGCCAAGTGGCTGCCT TCCGAGGCCTGTCTGCCCTGGCAGGACGAGGAGGGTCGTGTGCTCAACCGGGCGCTGGCCGCCAAGGTGGTGGAGCGGAT CCAGGGTCAACCCGCACTGGTGGAGGAGGTGGAGGAGCAGGCCCGCAAGCAGGCGGCGCCGCTGCCCTACAACCTCTCCA GCCTGCAGATCGATGCCGCCAAGCGGTTCGGCATGGACGCCAAGCGGGTGCTGGACGTCTGCCAGGGGCTCTACGAGCGC CACAAGCTGATTACCTACCCGCGATCCGACAGCCGTCATCTGCCGAGCGATCACTTCAACCGGGCCGGCCAGGTGCGGGA GGCCATCGCCAGCACGGCGCCGGCGCTGGCCAAGGCGGTGAGCGAGGCGGACGGCAAGATCCGCAGCAAGGCGTGGAACG ACGGCAAGGTGGACGCTCACCATGCCATCATCCCCACCGAGAAGCAGGGCAACCCGGCCACGCTGGGGGCTGACGAGGCG AAGCTTTACGGCCTGATTGCCCGTCAGTACCTGCTGCAGTTCTACCCGCCGTTCGAGTACAACGACAGCAAGGTGCTGCT GCGCATCGCCGGCGGCCTGTTCCAGGCCAAGGCGCGGCGGATCCTCAAGGCGGGCTGGAAGGCCCTATTGGGGGTGGAAG AAGATGACGACGAAGAGAAAGCCGGTACCCTGCCCGCCCTGAAAGAGGGGGAGCAGCTGCTGTGCGAGCGGGGGGCGCTG CTGGAGAAGATGACCCAGGCACCCAAGTCGTTCACCGATGCCACCCTGCTGGCCGCCATGACCGGCATCGCCCGCTACGT GCAGGACCCCGAGATCCGCAAGACACTGCGCGAGACCGACGGTCTCGGCACCGAGGCGACCCGGGCGGGCATCATAGATC TGCTGTTCAAGCGCCGTTTTCTGGTGCGCCAGGGCAAGAGCATCAAGGGCACCCCCACCGGACGGGCGCTGATCCTGGCG CTGCCTGCCACCGCCACCACGCCGGACATGACGGCGTTGTGGGAGCAGCACCTCGGCCGGATTGCCGAGCGGCAGACGAG CTATCAGCAATTCATGGGGCCGCTGACCGAGCAGTTGAACGGCCTGATCGACGGCGCCAGACAGGATTCGGGGGCCAGCT TCAGCGCCCTGCCCAAGGCGGTGCCCGGAGCCGACAAACGCCGCTTCACCAAGCGCAAGCGCAGCACGGCGGCTGGTGGC ACGAGCGGGACAGCCAAGCGGGGGAGCAAGCGGCCGGCCAAGGCTGCCTGA Protein sequence : MRLFIAEKPSLGRAIADVLPKPHKKGDGFIETAQGDVVTWCIGHLLEQAEPDAYDAAYKQWRMESLPIVPSQWQLVAKPK TKTQLTVIKRLLKQADCVVNAGDPDREGQLLVDEVIDFLGYGKTRPVLRCLISDLNPPAVRRALDKLRDNKEFVPLAVSA LARSRADWLYGINMTRAYTLLGRKGGCSELLSVGRVQTPLLGLVVRRDLEIEAFVPKPFFEVLAHLQTEGNERFSAKWLP SEACLPWQDEEGRVLNRALAAKVVERIQGQPALVEEVEEQARKQAAPLPYNLSSLQIDAAKRFGMDAKRVLDVCQGLYER HKLITYPRSDSRHLPSDHFNRAGQVREAIASTAPALAKAVSEADGKIRSKAWNDGKVDAHHAIIPTEKQGNPATLGADEA KLYGLIARQYLLQFYPPFEYNDSKVLLRIAGGLFQAKARRILKAGWKALLGVEEDDDEEKAGTLPALKEGEQLLCERGAL LEKMTQAPKSFTDATLLAAMTGIARYVQDPEIRKTLRETDGLGTEATRAGIIDLLFKRRFLVRQGKSIKGTPTGRALILA LPATATTPDMTALWEQHLGRIAERQTSYQQFMGPLTEQLNGLIDGARQDSGASFSALPKAVPGADKRRFTKRKRSTAAGG TSGTAKRGSKRPAKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 3e-114 | 44 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-114 | 44 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 4e-114 | 44 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 1e-105 | 42 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 2e-95 | 42 |
