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Name : kdsD (AHA_3928) Accession : YP_858367.1 Strain : Aeromonas hydrophila ATCC 7966 Genome accession: NC_008570 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 4354535 - 4355530 bp Length : 996 bp Strand : - Note : identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393 DNA sequence : ATGTCTGTAAAGTCTGAAAAAGTGTCTGAACTGTTCGATTTTCGTCGCAGCGCCCGTACCGTGCTGGACATCGAGAAACA AGCGATTGATGGACTCTACCAATACCTGAACGATGCCTTCGATCAGGCGTGCGAGATGATACTGCGCTGCAGTGGCAAGA TAGTGGTCACCGGCATGGGCAAGTCAGGTCATGTCGGAAGCAAGATTGCGGCCACCCTGGCCAGCACCGGCACTCCCGCC TTCTTCCTCCATCCGGGTGAAGCCAGCCACGGCGATCTGGGGATGATTTCCGGCGGCGATCTCATCATCGCCATCTCCAA CTCCGGCGAAAGCGACGAGATCCTGGCCCTGTTGCCGGTGCTCAAGCGCCGTGGTATCCCGCTCATCTGCATGACCGGCA ACCCGGCCTCCACCATGGCGAAAGAAGCCAACGTGCACCTGTGCATCAAGGTAGAGAAAGAAGCCTGCCCGCTGGGGCTG GCGCCCACGTCCAGTACCACCGCGACCCTGGTGATGGGCGATGCGCTGGCGGTGGCCCTGCTGGAAGCCCGCGGCTTTAC CGCCGACGATTTTGCCCTCTCTCACCCGGGCGGCTCCCTTGGCAAGCGACTGCTGCTGCGGGTCGGCGATCTGATGCACA GCGGCGAGCTGTTGCCCCAGGTGGGGATAGATGCCACCATCAGCCAGGCACTGCTGGAAGTGAGCCGCAAGGGACTCGGC ATGACGGCCGTGGCCAATGCCGATGGCCGCCTGGCCGGCCTGTTCACCGACGGTGACCTGCGCCGCATTCTGGACCTGCA GGTGGATATCCACCACACCCCGATCAGCCGTGTGATGACCGTCAACTGTGTTACCGTGGGACCTGAGATGATGGCAGCCG AGGCCGTCAAACTGATGGAAACCAGAAAAATCAACGGATTACTGGTTGTGGATGGCGACAAGCGCCCGCTGGGTGCCTTC AACATGCACGACCTGCTGAAAGCCGGAGTAATTTGA Protein sequence : MSVKSEKVSELFDFRRSARTVLDIEKQAIDGLYQYLNDAFDQACEMILRCSGKIVVTGMGKSGHVGSKIAATLASTGTPA FFLHPGEASHGDLGMISGGDLIIAISNSGESDEILALLPVLKRRGIPLICMTGNPASTMAKEANVHLCIKVEKEACPLGL APTSSTTATLVMGDALAVALLEARGFTADDFALSHPGGSLGKRLLLRVGDLMHSGELLPQVGIDATISQALLEVSRKGLG MTAVANADGRLAGLFTDGDLRRILDLQVDIHHTPISRVMTVNCVTVGPEMMAAEAVKLMETRKINGLLVVDGDKRPLGAF NMHDLLKAGVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-56 | 45 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-56 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 6e-56 | 44 |
