Gene Information

Name : deoA (AHA_3689)
Accession : YP_858144.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Unknown
Product : thymidine phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.4
Position : 4119888 - 4121219 bp
Length : 1332 bp
Strand : -
Note : identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02643; match to protein family HMM TIGR02644

DNA sequence :
ATGTTTTTGCCTCAAGAAATTATTCGCAAGAAGCGCAACGGTGAAGCGCTCAGTACCCAAGAGATTCAATTCTTCGTTCA
GGGCATTACCAACAACACCATCGGCGAGGGCCAGATTGCGGCGCTGGCGATGGCGGTCTACTTCAAAGACATGACCATGG
ATGAGCGGGTTGCCCTGACCTGCGCCATGCGCGATTCCGGCATGGTGCTGACCTGGGACCACCTCAATCTGGGTGGCCCG
ATCGTCGACAAGCACTCCACCGGCGGTGTGGGTGACGTCGTCTCCCTGATGCTCGGCCCGATGGTTGCCGCCTGCGGCGG
TTTCGTGCCGATGATCTCCGGCCGTGGCCTGGGCCACACCGGCGGTACCCTCGACAAGCTGGATGCCATTCCTGGCTACC
AGACCTCGGTCGACAACGATCGTTTCCTGAAAGTGGTGAAAGAGGCTGGTGTCGCCATCATCGGCCAGACCGGCGATCTC
GCCCCGGCCGACAAGCGTATCTATGCGGTACGGGACATCACTGCCACCGTCGAATCCATTGCCATGATCACCGGCTCCAT
CCTCTCCAAAAAGCTCGCCTCCGGGCTGGAAGCGCTGGTGATGGATGTGAAAGTGGGCTCCGGTGCCTTCATGCCGACCT
TTGAAGCCTCCGAAGAGCTGGCCAAGAGCATAGTCGCGGTGGCCAACGGCGCTGGCTGTCGCACTTCAGCACTCTTGACC
GACATGAACCAGGTGCTGGCCTCCAGCGCCGGCAACGCGGTGGAAGTGCGCGAAGCGGTGCGCTACCTGACCGGTGAATA
CCGCAACCCGCGCATTCACGCCGTCACCATGGCACTGTGTGCCGAGATGCTGATCTCCGCCGGCCTGGCCAGCGATGACG
GCGAGGCCCGCCGCAAGCTGCAGGCGGTGCTCGACAATGGCAAGGCGGCCGAGATCTTCGGTCGCATGGTGACCGGCCTC
GGCGGCCCGAGCGACTTCATGGAGCGCTACGATCACCACCTGCCGAAGGCCGCCATCGTGCGCCCTGTCTATGCTGCCAA
CAGCGGTTTCGTGACCGCCATGGACACCCGTGAACTGGGTCTGGCCGTGGTTGCCATGGGCGGTGGTCGTCGCGCTGCCG
GTGACAAACTTGATTATGCGGTCGGTCTGACCGACTTTATCCGCCTGGGTCAAAGTGTCGAGGCAGACAAGCCGCTCGCC
CTGATCCACGCTCAAACTGAAGAGCAATTCGCTCAGGCTGCCAGCATGGTGCAGGCCGCCGTCAAGATCGGTGACACCCG
ACCAGAGGCATTGCCCGAGGTCTACCGTCGCATCGGTCTGGCTGATTTGTAA

Protein sequence :
MFLPQEIIRKKRNGEALSTQEIQFFVQGITNNTIGEGQIAALAMAVYFKDMTMDERVALTCAMRDSGMVLTWDHLNLGGP
IVDKHSTGGVGDVVSLMLGPMVAACGGFVPMISGRGLGHTGGTLDKLDAIPGYQTSVDNDRFLKVVKEAGVAIIGQTGDL
APADKRIYAVRDITATVESIAMITGSILSKKLASGLEALVMDVKVGSGAFMPTFEASEELAKSIVAVANGAGCRTSALLT
DMNQVLASSAGNAVEVREAVRYLTGEYRNPRIHAVTMALCAEMLISAGLASDDGEARRKLQAVLDNGKAAEIFGRMVTGL
GGPSDFMERYDHHLPKAAIVRPVYAANSGFVTAMDTRELGLAVVAMGGGRRAAGDKLDYAVGLTDFIRLGQSVEADKPLA
LIHAQTEEQFAQAASMVQAAVKIGDTRPEALPEVYRRIGLADL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 3e-71 42