Gene Information

Name : AHA_3488 (AHA_3488)
Accession : YP_857962.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 3913090 - 3913815 bp
Length : 726 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGAATTCAACTCCCATTATCAACGTCAAGGGCCTGGGCAAGACAGTGCGCCTGGGCCAGGAAAGCCTCACCATCCTTGA
AGGGATCGACCTGCAAGTCAATAGCGGCGAAACGGTGGCGCTGGTCGGCGCCTCCGGCTCCGGCAAGTCCACCCTGCTGG
GGCTGCTGGCCGGGCTGGATCTGCCGAGCCAGGGAGATATCGAGATCCTCGGCCAGTCGTTGTTGCAGCTGGACGAGGAG
GGGCGTGCCCGGCTGCGGGCCGAGCAGGTGGGCTTTGTGTTCCAGTCCTTCCTGCTGCTGCCCACCCTGAGCGCGCTGGA
GAACGTCATGCTGCCTGCCGAGCTGCGTGGCGAGACCCGCTGCGAGCCGCGGGCTCGCGAGCTGCTGGCGGCGGTCGGCC
TCGGCGAACGGCTGCACCATCTGCCGCCGCGCCTCTCCGGCGGTGAACAGCAGCGGGTCGCCATTGCCCGGGCCTTCATG
ACCCGGCCCAGCCTGCTGCTGGCCGATGAACCCACCGGCAACCTCGACAGCAAGACCGGGGAGCGGGTGATCGAGCTATT
GTTCGAGCTCAACCGCGAGCATGGCACCACGCTCGTGGTGGTGACCCATGATCACGAGCTGGCTCAGCGTTGCCAGCGAC
AGCTGGTGATGGCGGCGGGCCGACTGGCGGCGGCTGTGTCAGCATCCGAAGCCGCCTCTGCAGCAAGAGTCAGGGAGCTG
TCATGA

Protein sequence : 
MNSTPIINVKGLGKTVRLGQESLTILEGIDLQVNSGETVALVGASGSGKSTLLGLLAGLDLPSQGDIEILGQSLLQLDEE
GRARLRAEQVGFVFQSFLLLPTLSALENVMLPAELRGETRCEPRARELLAAVGLGERLHHLPPRLSGGEQQRVAIARAFM
TRPSLLLADEPTGNLDSKTGERVIELLFELNREHGTTLVVVTHDHELAQRCQRQLVMAAGRLAAAVSASEAASAARVREL
S

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-22 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-23 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-23 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHA_3488 YP_857962.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-37 48
AHA_3488 YP_857962.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-30 48
AHA_3488 YP_857962.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-29 44
AHA_3488 YP_857962.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-27 44
AHA_3488 YP_857962.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 3e-26 41