Gene Information

Name : AHA_3289 (AHA_3289)
Accession : YP_857780.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein FixJ
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG4566
EC number : -
Position : 3707189 - 3707800 bp
Length : 612 bp
Strand : +
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00196

DNA sequence :
ATGACGTCCCCTGCCCGCCCCCCGCTCTATCTGGTTGACGACGACGAGGCCGTGCTCGACTCTCTGCGCTTCATGCTGGA
GAGCTGCGACGAGCGGCAGCTGTTCAGCTTTGCCGATGGCGAGCGCTTTCTGGCCGAGGTGGACCTGCACCAGCCCGCCT
GCCTCATCCTCGACTGCCGCATGCCGGGGCTGTCGGGCCCCGAGGTGCAGCAGCGGCTGAAGGCGGCCCAGAGCCCCATC
GCCATCCTGTTTCTCACCGGCCACGGCGAGGTGCCGCTGGCGGTGGAGTCCCTCAAGCTGGGGGCGGTGGATTTCTTGCA
AAAGCCGGTGCAGCTGGCCCCCCTGCTCGCCGCCATCGAACGGGCCGAGCAGGCTACCCTGAGTGCGGCCACCCGTTTCG
CCCAGCTGGCCGCCTATCAGCGGCTCACCCCGCGCGAGCACCAGCTGCTGCAGCTCATCGCCCGGGGCCACAAGAATCAG
CAGATAGCGCAGGATCTCTGCATCTCGGTGCGCACCGTCGAGGTGTGCCGCGCCAGCCTGATGAAACGCCTCGAGGTTGA
CTCCCTGGCCGAGCTGATGCTGCTCTATGCAAACGTCCATTCAGCCCCCTGA

Protein sequence :
MTSPARPPLYLVDDDEAVLDSLRFMLESCDERQLFSFADGERFLAEVDLHQPACLILDCRMPGLSGPEVQQRLKAAQSPI
AILFLTGHGEVPLAVESLKLGAVDFLQKPVQLAPLLAAIERAEQATLSAATRFAQLAAYQRLTPREHQLLQLIARGHKNQ
QIAQDLCISVRTVEVCRASLMKRLEVDSLAELMLLYANVHSAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 1e-32 45
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 2e-32 45
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 2e-32 45
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 2e-32 45
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 8e-33 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHA_3289 YP_857780.1 transcriptional regulatory protein FixJ VFG0488 Protein 2e-33 44