Gene Information

Name : alr-2 (AHA_2536)
Accession : YP_857049.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 2824216 - 2825325 bp
Length : 1110 bp
Strand : +
Note : identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492

DNA sequence :
ATGAACACAGTTACGGCCAGCATCGATATCGATGCACTCCAGCACAATTTCGCCGTGGTGCGCCGCCATGCCCCCCACAG
CAAGATCATCGCGGTACTCAAGGCCAATGCCTATGGCCACGGGCTGCTGCCGGTGGCCCACGCACTCGCCCAGGCCGATG
CCTATGCAGTGGCCAGGGTCGAGGAGGCGCTGGTGCTGCGCGCCAACGCCATCACCAAGCCCATTCTGGTGCTGGGAGGC
TTCTTCAGTGCCGAGGCGCTGCCGCTGCTGGCGAAACACGAACTGCAAACCACCTTGCATACCTGGGAGCAGCTGGCACT
GCTCGAGCAGGCCAGTCTGCCCGCCCCCATCAAGGTGTGGCTCAAGCTCGATACCGGGATGAACCGGCTCGGGCTGCGCG
CCGAGGAGCTGCCCGCTTTCATCGAGCGGCTGAGCCATTGTCGCAACGTGGTGCAGCCGTTCCATCTCATGACCCACTTC
AGCCAGTCCGATGAACAGGATACCCAGGCCACCCGGCTGCAGATCGAAGAGTTCAACCGCCTCTCTGCTCATCTGCCGGG
CGAGCGGGCCATGGCCAACTCCGCCGGCATCCTCGCCTGGCCGGCGTCCCGCAGCGACTGGATCCGGCCTGGTCTCATGC
TCTACGGCGCCTCCCCGTTTGCCGGTCAGCTCGCCGCCGACCATGACCTGCGTCCGGTCATGACCCTCAAGAGCCAGCTC
ATCGCCACCCGCGCCTGCGCGCAGGGCGAAGCGGTCGGCTATGGGGGACACTGGGTAGCGGATCGAAATACCACCCTCGG
CGTGGTGGCGGCGGGCTACGGGGATGGCTACCCCCGCATGGCGCCCGAAGGGACCCCCATGCTGATCAATGGCCGCCAGG
TACCCATCGTGGGTCGGGTTTCCATGGACATGATCACCGTCGATCTGGGGCCGGCGGCCCGCGACAAGGTGGGAGACGAG
GTGACGCTGTGGGGGGAAGGGCTGCCGGTGGAACAGGTGGCCGAAAAGATAGGCACCATCCCCTACGAACTGCTGACCCG
CCTGACCAGCCGGGTCCATCTCACGTACTGTGACAAGCGCGAACAGATGCCGATGTTGAAGCTGGCCTGA

Protein sequence :
MNTVTASIDIDALQHNFAVVRRHAPHSKIIAVLKANAYGHGLLPVAHALAQADAYAVARVEEALVLRANAITKPILVLGG
FFSAEALPLLAKHELQTTLHTWEQLALLEQASLPAPIKVWLKLDTGMNRLGLRAEELPAFIERLSHCRNVVQPFHLMTHF
SQSDEQDTQATRLQIEEFNRLSAHLPGERAMANSAGILAWPASRSDWIRPGLMLYGASPFAGQLAADHDLRPVMTLKSQL
IATRACAQGEAVGYGGHWVADRNTTLGVVAAGYGDGYPRMAPEGTPMLINGRQVPIVGRVSMDMITVDLGPAARDKVGDE
VTLWGEGLPVEQVAEKIGTIPYELLTRLTSRVHLTYCDKREQMPMLKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 8e-60 41