Gene Information

Name : AHA_1966 (AHA_1966)
Accession : YP_856497.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2158339 - 2159142 bp
Length : 804 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence :
ATGACGCTCACCATCAATCACCTGCAATTTGGCTATCAGCACAAGCCCGTCTTCAACGACATCTCCTTCACCATTCCCCA
GGGCAAGCTGGTGGGGATCGTCGGCCCCAACGGCGGCGGCAAGTCTACCCTGCTCAAACTTCTGGCAGGCCAGGAGCAGC
AGCAAGCCGGCGAGATCCTGCTCAAGGGCAAGCCGCTGGCCAGCTACGGCAAGAAGCCGCTGGCCCGCGAGCTCGCCTAC
CTGCCCCAGCGTCCGCTGGTGCCCGCCGGCATCCAGGTCGAGCAGCTGGTGCAGTACGGCCGCCATCCCCATCAGGGCTG
GTTCAATCAGTGGAGCGAGGAGGATGCGCGCATGGTGCGCTGGGCCTGCGAGCGGATGCAACTGGGCGACATTTTGCAGC
AGAGCGCCAGCTCTCTCTCCGGCGGCCAGGCCCAGCGGGTGTGGCTCGCCATGGTGCTGGCCCAGGATGCGGACATCATC
CTGCTGGATGAACCCACCAGCGCCCTCGACATCGGTCACCAGACCGAGGTGATGGAGGCCATCCACCAGATCACCGCCGA
GGGCAAGACGGTGCTCATCGTCATCCACGATCTCGCCACCGCCGCCCGCTACTGCGACGAGCTGATCGCGCTGGGTGATG
GCGGCATCCAGGCCATGGGGCCGGCCCGCGAGGTGGTGACCAAGTCCCTCATCGACCGCCTCTACCAGACCGACGTGGAC
ATACTGCACGCCCCCGGCGACGGCGCCCCCATCATAGTGCCCCGCCGCAGACCACACGCCTTTGCCATGCGCCAACCGGC
CTGA

Protein sequence :
MTLTINHLQFGYQHKPVFNDISFTIPQGKLVGIVGPNGGGKSTLLKLLAGQEQQQAGEILLKGKPLASYGKKPLARELAY
LPQRPLVPAGIQVEQLVQYGRHPHQGWFNQWSEEDARMVRWACERMQLGDILQQSASSLSGGQAQRVWLAMVLAQDADII
LLDEPTSALDIGHQTEVMEAIHQITAEGKTVLIVIHDLATAARYCDELIALGDGGIQAMGPAREVVTKSLIDRLYQTDVD
ILHAPGDGAPIIVPRRRPHAFAMRQPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-42 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-37 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-37 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-37 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-37 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHA_1966 YP_856497.1 iron ABC transporter ATP-binding protein VFG0925 Protein 1e-37 42