Gene Information

Name : araD (AHA_1901)
Accession : YP_856432.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : 5.1.3.4
Position : 2075784 - 2076482 bp
Length : 699 bp
Strand : -
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGAATCTCAAGATGCTCAAGGAGCAGGTGCTCGTCGCCAACCTGGATCTGCCGCGCCACGAGCTGGTGACCTTCACCTG
GGGCAACGTGAGCGGCATCGACCGAGAGCGCAACCTGGTGGTGATAAAGCCAAGCGGCGTCAGTTATGAGCGGATGCTGC
TCGAAGACATGGTGGTGCTGGATCTGGCGGGCAAGCAGGTGGAAGGTGCCTTGCGCCCCTCCTCCGATACCGCCACCCAC
CTGGTGCTCTATCGCGCCTATCCGGAGCTTGGCGGCGTGGTACACACCCACTCCACCCACGCCACCGCCTGGGCCCAGGC
GGGGCGCCCCATCCCCATTTTCGGCACCACCCAGGCCGACTACTTCCACGGCGAGATCCCCTGCTCGCGCCTGCTTACCC
CGGGTGAGGTGGAGGAGGATTACGAGGGGCTGACCGGTCACCTCATCGTCGAGACCCTCAAGCAGACCCCCATTCTCACC
ATGCCGGGGGTGCTGGTGGCCAACCACGGCCCCTTCAGCTGGGGCAAGAGCGCCGAGGACGCGGTACACAACGCCGTGGT
ACTGGAAGAGGTGGCCCGCATGGCCTGGCTCACCGGCCAGATCAACCCCGCCGCGCGCCCCCTGCCCGATTACCTGCTGG
AGAAGCACTACCAGCGCAAACATGGCAAACACGCCTATTACGGCCAGACAAAAGCATAA

Protein sequence :
MNLKMLKEQVLVANLDLPRHELVTFTWGNVSGIDRERNLVVIKPSGVSYERMLLEDMVVLDLAGKQVEGALRPSSDTATH
LVLYRAYPELGGVVHTHSTHATAWAQAGRPIPIFGTTQADYFHGEIPCSRLLTPGEVEEDYEGLTGHLIVETLKQTPILT
MPGVLVANHGPFSWGKSAEDAVHNAVVLEEVARMAWLTGQINPAARPLPDYLLEKHYQRKHGKHAYYGQTKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 2e-62 57