|
Name : serS (AHA_1868) Accession : YP_856399.1 Strain : Aeromonas hydrophila ATCC 7966 Genome accession: NC_008570 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2042654 - 2043949 bp Length : 1296 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGGATCCCAAATATCTGCGCAGCGATATCGCCGAAGCTGCCGCTCGTCTGGCGACACGTGGCTACGTTCTAGACGT AGCGGCTGTCAATGCTCTGGAAGAGAAACGCAAGGATCTGCAGTCCCGTACCCAGGAGCTGCAGGCCGAGCGCAACGCCC GCTCCAAATCCATCGGTGAGGCTGCCCGTCGTGGCGAAGATGTTGCCCCGCTCAAGGCCGAGGTCACCAAGATCAACGAA GAGCTCGAGACCAGCAAGGTCGAGCTGGATGCCCTGTTGGCCGAGCTGAAGGTCATCGCAGACGCCATCCCCAACCTGCC GAGCGACACCACCCCGGTCGGTCGTGACGAGAACGACAACGTGGAAGTGCGCCGTTGGGGCACCCCGCGCGAGTTCAGCT TCCCGGTACGCGATCACATCGATCTGGGTGAAGCGGCCAAGGGCGTTGACTTCAAGAACGGCGTCAAGCTCTCCGGCTCC CGCTTCGTGGTGATGAAGGGCCAGATTGCCCGTCTGCACCGTGCCCTGGCCCAGTTCATGCTGGACCTGCACACCCTGCA GCACGGTTACACCGAGTGCTACGTGCCCTATCTGGTCAACCCGGACAGCCTGTACGGTACCGGCCAGCTGCCGAAGTTCT CCCAGGACCTGTTCAATACCGGCATCGACGGCGAAGGGGAAGAAGAGGGCAAGGTACGCAAGTTCTCCCTGATCCCGACC TCCGAAGTGCCGCTCACCAACATGGCCCGCGACGAGATCTTCGACGAGCAGGAACTGCCCATCAAGATGACCGCCCACAG TCCCTGCTTCCGTTCCGAAGCGGGCTCCTACGGCCGTGATACCCGTGGCCTCATCCGCATGCACCAGTTCGACAAGGTCG AGATGGTCCAGCTGGTGCACCCTGAGAAATCCTGGGAAGCGCTGGAAGAGATGGCGGGTCACGCCGAGAAGGTGCTGCAG CTGCTGGAGCTGCCGTATCGTGTGATGGCGCTCTCCACTGGTGACATGGGCTTCTGCGCCGCCAAGACCTACGATCTGGA AGTGTGGCTGCCGGCCCAGAACACCTACCGCGAGATCTCCTCCGTCTCCAACTGCACCGACTTCCAGGCGCGCCGCATGC AGGCTCGCGTGCGCATCGATGGCAAGCCGCAGCTGCTGCACACCCTGAATGGCTCCGGCCTGGCTGTGGGTCGCACCTTG GTGGCGGTGATCGAGAACTACCAGCAGGAAGACGGCCGCATCGCCATCCCGGCGGCGCTGCAATCCTACATGGGCGGCCT GACCCACATCGGGTAA Protein sequence : MLDPKYLRSDIAEAAARLATRGYVLDVAAVNALEEKRKDLQSRTQELQAERNARSKSIGEAARRGEDVAPLKAEVTKINE ELETSKVELDALLAELKVIADAIPNLPSDTTPVGRDENDNVEVRRWGTPREFSFPVRDHIDLGEAAKGVDFKNGVKLSGS RFVVMKGQIARLHRALAQFMLDLHTLQHGYTECYVPYLVNPDSLYGTGQLPKFSQDLFNTGIDGEGEEEGKVRKFSLIPT SEVPLTNMARDEIFDEQELPIKMTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQLVHPEKSWEALEEMAGHAEKVLQ LLELPYRVMALSTGDMGFCAAKTYDLEVWLPAQNTYREISSVSNCTDFQARRMQARVRIDGKPQLLHTLNGSGLAVGRTL VAVIENYQQEDGRIAIPAALQSYMGGLTHIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-101 | 55 |
