Gene Information

Name : AHA_1841 (AHA_1841)
Accession : YP_856375.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Virulence
Product : ClpA/ClpB family protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2007876 - 2010518 bp
Length : 2643 bp
Strand : +
Note : identified by match to protein family HMM PF00004; match to protein family HMM PF07724; match to protein family HMM PF07728

DNA sequence :
TTGATTCGTATAGAGCTACCGGTACTGGTGGAAAGACTCAACCCCATCTGCCGTCACATGCTGGAAGAGGCTGCGGCCCT
CTGCGTTAATCACCAGGGAGCCGAGATCCGCATCGAGCATTTGCTCCTGAAGATGCTGGAGACCCCGCTGAGCGATGTGC
GCCAGATCCTGAAGGTGGCCGAGGTGGAGGTGGAAGAGCTCAAGACCCTGCTGCAACCGTCCGCTGCCGACAGCAGCTAT
GGCCAGGGTTACCCTTCCTTCTCGCCCATGCTGGTGGAGTGGCTGCAAGACAGCTGGCTGCTCGCCTCTGCCGAGCTGCA
ACATGCCCAGCTGCGCAGCGGTGTCATGCTGCTGGTGCTGCTGATGACCCCCCAGCGCTACCTGCCGGGTTCGGTGACCC
GCCTGCTTGCCAAGGTCAATCGCGAGCTGCTGCGCCAGCAGTTTGACGAGTGGGTCAAGGAGTCCGCCGAGACGCAAGTG
ACCAACGCCCCCGGCGGCAAGACGGCCCAGACCGCCCTGCCAGCCGATGCCAGCCTGCTGGCTCGCTTTACCGTCAACGT
GACCGAGCAGGCCCGCCAGGGCAGCCTGGATCCCGTGCTCTGCCGGGATCACGAAATCGACCTGATGATCGACATCCTCT
CCCGTCGTCGCAAGAACAACCCCATAGTCGTGGGGGAGGCCGGGGTCGGCAAGAGCGCCCTGATCGAGGGGCTGGCCCTG
CGCATGGTGGCGGGTCAGGTGCCCGAGAAGCTGCGCGGGGTCGAGCTGATGACCCTGGATCTGGGTGCCATACAGGCCGG
CGCCTCGGTCAAGGGGGAGTTCGAGAAGCGCTTCAAGGGGGTGATGCAGGAGGTCAAGGACGCCGTGCAACCTGTCATCC
TGTTCATCGACGAGGCGCACACCCTGATCGGGGCCGGCAACCAGGCCGGCGGACTGGATGTTTCCAACCTCATCAAGCCG
GCGCTGGCCCGGGGCGAGCTGCGCACCATCGCTGCCACCACCTGGGGCGAGTACAAGAAATACGTGGAGAAAGACGCGGC
CTTGTCGCGCCGCTTCCAGCTGGTGAAAGTGGGTGAGCCCGATGCCGACGAGGCCACGGTGATCCTGCGCGGCCTGCGCA
GCATCTACGAGAAGGCCCACGGGGTGCTGATCGACGAGGAGGCGTTGCAGGCCGCTGCCCAGCTCTCCGCCCGCTACATC
TCCGGCCGTCAGCTGCCGGACAAGGCGATCGACGTGCTCGATACCGCCTGTGCCCGGGTGGCCATCAACCTCACCACCCC
GCCGCGCGCGGTCAGCCACCTGCAAAACGCGCTGCGCCAGCGCGAGCTGGAGATCCGCCAGCTGGAGCGCCAGAGCCTGA
TAGGTCTCGGTGACAACGCAGAGCGCCTGGCCGAGTTGCAGGCGGCCCAGCAGGCTTGCCGTGAAGAACTGGCCGAGCAG
GAGGCCCGGTGGCAGCAGCAGCAGGGGCTGGTACACCAGATTGTCGAGCTGCGCGCAGCCCTGCTGGCCGATCAGCAGGA
TGAGATGCTGGCCAGAGAGGCGCTGGATCTGGCCGATGCGCCGCTCGATCCGCAAGCCGCTGCCGAGCAGCTGGCCATCC
TCGAGCGCGAGCTGGCCGAACTGCAGCAAGGAGAAGTGCTGGTCTCCGCCCACGTCGACAAGACCCAGATTGCCGCCGTC
ATCGCCGAGTGGACCGGGGTGCCCCTCAATCGTATCTCGCAAGGGGAGCTCGATGTGGTGACCCGTCTGCCGGAATACCT
CGGCGAGCTCATCAAGGGGCAGGATGTGGCGGTGGCTCACCTGCACAAGCACTTGTTGACCGCCCGCGCGGACCTGCGTC
GTCCCGGCCGGCCGCTCGGCGCCTTCCTGCTGGTGGGACCGAGCGGGGTCGGCAAGACCGAAACCGTGCTGCAGATCGCC
GAGCTGATGTTCGGTGGCCGCCAGTATCTGACCACCATCAACATGTCCGAGTATCAGGAGAAGCACACCGTCTCGCGCCT
GATCGGCTCGCCGCCCGGCTACGTCGGTTTTGGCGAGGGGGGCGTGCTGACCGAGGCCATTCGGCAGAAACCTTACTCCG
TGGTGCTGCTGGATGAGGTGGAGAAGGCCCACCCGGACGTGCTCAACCTCTTCTATCAGGCGTTTGACAAGGGCGAGCTG
GCGGACGGGGAAGGGCGTATCATCGACTGCAAGAACGTGGTCTTCTTCCTCACCTCCAACCTCGGTTTCCAGACCATCGT
GGATCACGCCGAGCAGCCCGACGTGCTGCTGGACGCCCTCTATCCGGAGCTCGCCGCCTTCTTCAAGCCGGCGCTGCTGG
CGCGCATGGAGGTGATCCCCTATCTGCCGCTCGGTCACGATACCCTGGTACAGATCGTGGGCGGCAAGCTCAACCGGCTG
GTCAAGCTGCTCAAGGAGCGCTTTGGCGCCGAGGTGGTGCTGGACGACGAGGTGGCCGAGGAGATCCTGCTGCGGGCCAA
TCGCAGCGAGAACGGTGCCCGCATGCTCGAATCCGTCATCGACGGTGCCCTGCTGCCGCCTGTTTCCCTGCAACTGCTGC
AGCGCCTCTCGGCCGGTGAACCCATCAAGCGCGTCCACTTTTCCGTGGCCGATCACCAGTTTGTGGCCGAGGTGGGGGCT
TGA

Protein sequence :
MIRIELPVLVERLNPICRHMLEEAAALCVNHQGAEIRIEHLLLKMLETPLSDVRQILKVAEVEVEELKTLLQPSAADSSY
GQGYPSFSPMLVEWLQDSWLLASAELQHAQLRSGVMLLVLLMTPQRYLPGSVTRLLAKVNRELLRQQFDEWVKESAETQV
TNAPGGKTAQTALPADASLLARFTVNVTEQARQGSLDPVLCRDHEIDLMIDILSRRRKNNPIVVGEAGVGKSALIEGLAL
RMVAGQVPEKLRGVELMTLDLGAIQAGASVKGEFEKRFKGVMQEVKDAVQPVILFIDEAHTLIGAGNQAGGLDVSNLIKP
ALARGELRTIAATTWGEYKKYVEKDAALSRRFQLVKVGEPDADEATVILRGLRSIYEKAHGVLIDEEALQAAAQLSARYI
SGRQLPDKAIDVLDTACARVAINLTTPPRAVSHLQNALRQRELEIRQLERQSLIGLGDNAERLAELQAAQQACREELAEQ
EARWQQQQGLVHQIVELRAALLADQQDEMLAREALDLADAPLDPQAAAEQLAILERELAELQQGEVLVSAHVDKTQIAAV
IAEWTGVPLNRISQGELDVVTRLPEYLGELIKGQDVAVAHLHKHLLTARADLRRPGRPLGAFLLVGPSGVGKTETVLQIA
ELMFGGRQYLTTINMSEYQEKHTVSRLIGSPPGYVGFGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGEL
ADGEGRIIDCKNVVFFLTSNLGFQTIVDHAEQPDVLLDALYPELAAFFKPALLARMEVIPYLPLGHDTLVQIVGGKLNRL
VKLLKERFGAEVVLDDEVAEEILLRANRSENGARMLESVIDGALLPPVSLQLLQRLSAGEPIKRVHFSVADHQFVAEVGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 0.0 64
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 0.0 64
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-118 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AHA_1841 YP_856375.1 ClpA/ClpB family protein VFG2084 Protein 0.0 60