Gene Information

Name : AHA_1023 (AHA_1023)
Accession : YP_855569.1
Strain : Aeromonas hydrophila ATCC 7966
Genome accession: NC_008570
Putative virulence/resistance : Unknown
Product : LuxR family DNA-binding response regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 1103654 - 1104292 bp
Length : 639 bp
Strand : -
Note : identified by match to protein family HMM PF00072; match to protein family HMM PF00196

DNA sequence :
ATGTCTTCCAAGATCATTCTTGCCGACGATCACCCGCTGATACTTACCGGGATCCGCAGCCTTATTGCACAACACCAAGC
TGGTTGCGAAATTGTTGCCGAAGCACATCAAGTTTCTGAATTATTCAAAACATTGCAGCAACATCACTGCGATCTTTTGA
TAACTGACTTCAGTATGCCGGGTGACTCACGTAGCGATGGCCTGGCCATGATCCAGAGTTTAAAAAGGAATTACCCACAG
CTATCCATTATCGTGCTGACGCAGATACAAAATGCCGGAATACTCCGAGCCTTGCTGCAACTTGGTGTCAGTGGAATATT
ATTGAAGAAAGCTGTCATCAGTGAACTATCGGATGCCATTCACCATGTTTTGTCTGGTCAAGAATATCTTGGCCATTCGG
TGAAAATGTTATTGGCAGAAAGCGGTATGACTAACCCAGATGAACCACTGCAACTGACCCCCAAGGAAAATGAAGTCGTA
CGTCTACTGGCCAGCGGCATGTCAGTTTCTCAAGTTGCCGAGTATTTGAATCGCAGCATCAAGACCATCAGCACCCAGAA
GAAGAGCGCCATGCAGCGGCTCGGTCTGCACAGCGACAGTGCGCTGTTTCAATATGCCAAAGAAAAAGGGTTGGTTTAA

Protein sequence :
MSSKIILADDHPLILTGIRSLIAQHQAGCEIVAEAHQVSELFKTLQQHHCDLLITDFSMPGDSRSDGLAMIQSLKRNYPQ
LSIIVLTQIQNAGILRALLQLGVSGILLKKAVISELSDAIHHVLSGQEYLGHSVKMLLAESGMTNPDEPLQLTPKENEVV
RLLASGMSVSQVAEYLNRSIKTISTQKKSAMQRLGLHSDSALFQYAKEKGLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rcsB AAP84166.1 RcsB Not tested PAPI-1 Protein 6e-23 41