Gene Information

Name : gpF1 (APECO1_8)
Accession : YP_852027.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3497
EC number : -
Position : 948154 - 949020 bp
Length : 867 bp
Strand : +
Note : Phage tail sheath protein

DNA sequence :
ATGTTACTCACCGATCTCCTTCACGGTAATACGCACCTGCTGGCGGCGGAGTCGGTAACCGGTGTTAAACCGCGTATTCT
CGGTGTGCCGGGACTGGATACCAAAGAGGTGGCTGTTGCACTGGCATCCGTCTGTCAGAAGCTGCGCGCTTTCGGGTATA
TCAGCGCATGGGGCTGTAAAACCATTTCCGAGGTGAAAGCCTACCGCCAGAATTTCAGCCAGCGTGAGCTGATGGTCATC
TGGCCGGATTTCCTCGCATGGGATACGGTCACCAGTACCACCGCCACCGCGTATGCCACCGCCCGTGCGCTGGGTCTGCG
CGCTAAAATCGACCAGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGGGTAAACGGTGTTACCGGCATCAGCGCCT
CTGTATTCTGGGATTTGCAGGAGTCCGGCACCGATGCTGACCTGCTTAACGAGTCAGGCGTCACTACGCTGATTCGCCGC
GACGGTTTCCGCTTTTGGGGTAACCGTACCTGCTCTGATGACCCGCTGTTTCTCTTTGAAAACTACACCCGCACCGCGCA
GGTGCTGGCCGACACGATGGCTGAGGCGCACATGTGGGCGGTGGACAAGCCCATCACCGCAACGCTGATTCGCGATATCG
TTGACGGCATCAATGCCAAATTCCGTGAGCTGAAAACAAACGGCTATATCGTGGATGGCTCATGCTGGTTCAGCGAAGAA
TCCAACGATGCGGAAACCCTCAAGGCCGGAAAACTGTATATCGACTACGACTATACACCGGTGCCTCCTCTCGAAAACCT
GACCCTGCGCCAGCGTATTACCGATAAATACCTGGCAAATCTGGTCACCTCGGTTAACAGCAATTAA

Protein sequence :
MLLTDLLHGNTHLLAAESVTGVKPRILGVPGLDTKEVAVALASVCQKLRAFGYISAWGCKTISEVKAYRQNFSQRELMVI
WPDFLAWDTVTSTTATAYATARALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIRR
DGFRFWGNRTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDGSCWFSEE
SNDAETLKAGKLYIDYDYTPVPPLENLTLRQRITDKYLANLVTSVNSN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4607 NP_458690.1 probable major tail sheath protein Not tested SPI-7 Protein 4e-87 69
t4301 NP_807898.1 major tail sheath protein Not tested SPI-7 Protein 4e-87 69
unnamed ABR13484.1 putative tail sheath protein Not tested PAGI-6 Protein 3e-86 68