|
Name : gpF1 (APECO1_8) Accession : YP_852027.1 Strain : Escherichia coli APEC O1 Genome accession: NC_008563 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : R : General function prediction only COG ID : COG3497 EC number : - Position : 948154 - 949020 bp Length : 867 bp Strand : + Note : Phage tail sheath protein DNA sequence : ATGTTACTCACCGATCTCCTTCACGGTAATACGCACCTGCTGGCGGCGGAGTCGGTAACCGGTGTTAAACCGCGTATTCT CGGTGTGCCGGGACTGGATACCAAAGAGGTGGCTGTTGCACTGGCATCCGTCTGTCAGAAGCTGCGCGCTTTCGGGTATA TCAGCGCATGGGGCTGTAAAACCATTTCCGAGGTGAAAGCCTACCGCCAGAATTTCAGCCAGCGTGAGCTGATGGTCATC TGGCCGGATTTCCTCGCATGGGATACGGTCACCAGTACCACCGCCACCGCGTATGCCACCGCCCGTGCGCTGGGTCTGCG CGCTAAAATCGACCAGGAGCAGGGCTGGCATAAAACGCTGTCCAACGTCGGGGTAAACGGTGTTACCGGCATCAGCGCCT CTGTATTCTGGGATTTGCAGGAGTCCGGCACCGATGCTGACCTGCTTAACGAGTCAGGCGTCACTACGCTGATTCGCCGC GACGGTTTCCGCTTTTGGGGTAACCGTACCTGCTCTGATGACCCGCTGTTTCTCTTTGAAAACTACACCCGCACCGCGCA GGTGCTGGCCGACACGATGGCTGAGGCGCACATGTGGGCGGTGGACAAGCCCATCACCGCAACGCTGATTCGCGATATCG TTGACGGCATCAATGCCAAATTCCGTGAGCTGAAAACAAACGGCTATATCGTGGATGGCTCATGCTGGTTCAGCGAAGAA TCCAACGATGCGGAAACCCTCAAGGCCGGAAAACTGTATATCGACTACGACTATACACCGGTGCCTCCTCTCGAAAACCT GACCCTGCGCCAGCGTATTACCGATAAATACCTGGCAAATCTGGTCACCTCGGTTAACAGCAATTAA Protein sequence : MLLTDLLHGNTHLLAAESVTGVKPRILGVPGLDTKEVAVALASVCQKLRAFGYISAWGCKTISEVKAYRQNFSQRELMVI WPDFLAWDTVTSTTATAYATARALGLRAKIDQEQGWHKTLSNVGVNGVTGISASVFWDLQESGTDADLLNESGVTTLIRR DGFRFWGNRTCSDDPLFLFENYTRTAQVLADTMAEAHMWAVDKPITATLIRDIVDGINAKFRELKTNGYIVDGSCWFSEE SNDAETLKAGKLYIDYDYTPVPPLENLTLRQRITDKYLANLVTSVNSN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t4301 | NP_807898.1 | major tail sheath protein | Not tested | SPI-7 | Protein | 4e-87 | 69 |
| STY4607 | NP_458690.1 | probable major tail sheath protein | Not tested | SPI-7 | Protein | 4e-87 | 69 |
| unnamed | ABR13484.1 | putative tail sheath protein | Not tested | PAGI-6 | Protein | 3e-86 | 68 |
