Gene Information

Name : APECO1_2308 (APECO1_2308)
Accession : YP_859753.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4718111 - 4718875 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGATTAATGATGTGAACCGAAGTCAACGGAGATCATTCCCCCTGAACCTGCATCCAGTGTTCTTTCCCTTATCTTCCCG
TTCTGCTTCGGTTCTTCACTTATTCCATCAACTCCATCCGCAAACCATAACACGTCAGCTTATTCACGGGCAGGACGCAT
TGTGGGCTGCGCATAACGGAGCATATCTTATGAATGCTATCCCTTATTTCGACTATAGCCTGGCCCCCTTCTGGCCATCT
TATCAGAACAAAGTCGTCGGCGTCCTTGAGCGTGCGCTGCGTGAGCAGTCCGGCTCACGGATACGGCGGATCCTGCTTCG
TCTGCCGTGTGAATATGACAATACCTTCAACAGCAGAACGACCTGGTTTGGTATGGATTTTATCGAAACCGTCAGTGCGC
TGATGAATGCAACCCCCGGACGTGATCTCTGCTGGCTCCTGACCCGTCATCCTGAAAAACCGGAATACCACGTGGTGCTG
TGCGTCAGACAGGAGTATTTCGATGGCCCTGAATTGGACCGGTTGATACTGGATGCCTGGAGTAACGTACTGGGCTTCGC
GTCACCGGGTGAAGCAAAGCAGTATCAGAAGCAGATCACCCGGGATGTGGTGCTGGACAGTCGTTCACCGGACTGTGAAA
ACATCCTCAAAGAGTTGATATGGGCGTTCAGTGATTTCGCCCGCGATCGTCGTGGTGTGTGCGATCCGGAAGCCCGTTGC
CTCGCCGGTAATCCCGGCTATCCCGGATCTGCAGGACCGTTCTGA

Protein sequence : 
MINDVNRSQRRSFPLNLHPVFFPLSSRSASVLHLFHQLHPQTITRQLIHGQDALWAAHNGAYLMNAIPYFDYSLAPFWPS
YQNKVVGVLERALREQSGSRIRRILLRLPCEYDNTFNSRTTWFGMDFIETVSALMNATPGRDLCWLLTRHPEKPEYHVVL
CVRQEYFDGPELDRLILDAWSNVLGFASPGEAKQYQKQITRDVVLDSRSPDCENILKELIWAFSDFARDRRGVCDPEARC
LAGNPGYPGSAGPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33738.1 hypothetical protein Not tested PAI I 536 Protein 1e-76 95
unnamed CAD42061.1 hypothetical protein Not tested PAI II 536 Protein 9e-73 94
APECO1_3515 YP_854260.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-74 93
ORF_19 AAZ04429.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-74 93
c5193 NP_757041.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-88 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_2308 YP_859753.1 hypothetical protein VFG1479 Protein 6e-77 95
APECO1_2308 YP_859753.1 hypothetical protein VFG1580 Protein 5e-73 94