Gene Information

Name : APECO1_3031 (APECO1_3031)
Accession : YP_859023.1
Strain : Escherichia coli APEC O1
Genome accession: NC_008563
Putative virulence/resistance : Virulence
Product : fimbrial chaperone protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3857029 - 3857808 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence : 
ATGTTATTTCATCAACAAGGATGCTGTATGAAATGTATTATTGGAAATAAAAAATGGGTTTGTGGATTCAGGGATGAATT
AAAAGTATCACAAAATATTATACGCTCAGGGATTCTTTTTTTACTATCGATATTATTTATTAATAATGCGTCCGCGGGCG
GGTTTGGCCTTGGCGTAACGCGATTGATTTATCCGGCAGAAAGTAAGCAAATAACACTCAGTGTGCAAAATAGCGGTGAC
AACACCAGTTATTTAATTCAATCATGGGTTGATGACAGTAAAACGGAAAAAAAGAGCCAGGATTTTGTTATCACTCCTCC
CCTCTTTATGTTGCCAACGCGTAAAGAAGCTTCATTACGTATCATGTTTCTTGGTAAGACTAATTTGCCGACCGATCGTG
AAACTTTGTATTGGATGAATGTTAAAGCAATTCCGCCAACAGATGAGAAAAATACACAGAAGAATACCTTACAGTTGGCA
TTACAAAACAAAATCAAGCTATTTTATCGCCCGGAAAATCTACCTGTGCAACCAGGAAAAGCACGAAATATGTTGCGGTT
TAAGTATGAGGGAAAACAACTAAAAGTTATCAATCCTTCGCCTTATTACCTGACACTGACAGGAATTAAAGTACAAGGGA
GTAAATTGCCCAATATGTTTGTACCACCGAAAAGTGATATTACGGTCTCGTCGCCAGTGACGTTGGCTGGTGAAATTACT
TATCAAACAATTAATGACTTTGGTGCTACGACGGAGCGGCAGAAAGGAATAATGCAGTAA

Protein sequence : 
MLFHQQGCCMKCIIGNKKWVCGFRDELKVSQNIIRSGILFLLSILFINNASAGGFGLGVTRLIYPAESKQITLSVQNSGD
NTSYLIQSWVDDSKTEKKSQDFVITPPLFMLPTRKEASLRIMFLGKTNLPTDRETLYWMNVKAIPPTDEKNTQKNTLQLA
LQNKIKLFYRPENLPVQPGKARNMLRFKYEGKQLKVINPSPYYLTLTGIKVQGSKLPNMFVPPKSDITVSSPVTLAGEIT
YQTINDFGATTERQKGIMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 2e-46 47
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-45 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
APECO1_3031 YP_859023.1 fimbrial chaperone protein VFG0911 Protein 1e-45 48
APECO1_3031 YP_859023.1 fimbrial chaperone protein VFG1644 Protein 2e-45 47
APECO1_3031 YP_859023.1 fimbrial chaperone protein VFG0875 Protein 6e-50 46
APECO1_3031 YP_859023.1 fimbrial chaperone protein VFG0445 Protein 3e-48 45
APECO1_3031 YP_859023.1 fimbrial chaperone protein VFG0455 Protein 3e-37 41