Name : gspC (APECO1_3457) Accession : YP_854408.1 Strain : Escherichia coli APEC O1 Genome accession: NC_008563 Putative virulence/resistance : Virulence Product : type II secretion protein GspC Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3031 EC number : - Position : 3388651 - 3389493 bp Length : 843 bp Strand : - Note : part of the general (type II) secretion pathway (GSP), a signal sequence-dependent process responsible for protein export; involved in trans-location of exoproteins from the cytoplasm to the periplasm DNA sequence : ATGGTGCGCGGGATGTTCTGGCTCATGCTGCTTATTATTTCTGCAAAAATGGCGTATTCACTCTGGCGCTATTTCTCCTT TTCTGCGGAATATACGGCGGTTTCCTCATCGGTGAATAAACCGCTCCGTGCGGATGCAAAACCGTTCGATAAAAATGACG TGCAATTAGTCAGCCAACAAAACTGGTTTGGCAAATATCAACCCGTCGCCGCACCGGTAAAACAACCTGAATCTGCGCCT GTGGCAGAAACGCGTCTTAATGTGGTGCTGCGTGGGATCGCCTTTGGTGCCAGACCCGGCGTGGTGATTGAAGAAGGCGG CAAACAGCAGGTCTATTTGCAGGGTGAACGGCTTGGCTCTCACAACGCAGTGATTGAGGAAATCAACCGCGACCATGTGA TGCTGCGCTATCAGGGGAAAATGGAACGTCTGAGTCTGGCAGAGGAGGAACGCCCCCCTGTGGCGGTGACCAGCAAAAAA GCCGCCAGCGACGAAGCAAAGCAAGCTGTTGCTGAACCTGTCGTCAGTGCGCCAGTGGAGATCCCGGCTGCCGTGCGTCA GGCACTGGCGAAAGATCCGCAGAAAATTTTTAACTATATCCAGCTTACGCCTGTGCGTAAGGAGGGAATTGTCGGTTATG CAGTGAAGCCGGGGGCAGATCGTTCTCTGTTCGATGCCAGCGGTTTCAGGGAAGGCGATATCGCCATTGCGCTAAATCAG CAGGATTTCACTGATCCACGAGCAATGATTGCTCTGATGCGGCAGTTACCTTCAATGGATTCCATTCAACTTACGGTTTT ACGCAAGGGTGCGCGCTACGACATTTCCATCGCACTGCGCTAA Protein sequence : MVRGMFWLMLLIISAKMAYSLWRYFSFSAEYTAVSSSVNKPLRADAKPFDKNDVQLVSQQNWFGKYQPVAAPVKQPESAP VAETRLNVVLRGIAFGARPGVVIEEGGKQQVYLQGERLGSHNAVIEEINRDHVMLRYQGKMERLSLAEEERPPVAVTSKK AASDEAKQAVAEPVVSAPVEIPAAVRQALAKDPQKIFNYIQLTPVRKEGIVGYAVKPGADRSLFDASGFREGDIAIALNQ QDFTDPRAMIALMRQLPSMDSIQLTVLRKGARYDISIALR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspC | CAE85235.1 | GspC, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-113 | 94 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
gspC | YP_854408.1 | type II secretion protein GspC | VFG2046 | Protein | 2e-110 | 92 |